RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ENAHQ8N8S7 591 aaPredicted RBP27.34■■□□□ 1.97
SLIT3-204ENST00000518140 ZSCAN10Q96SZ4 725 aaPredicted RBP27.34■■□□□ 1.97
SLIT3-204ENST00000518140 ERICH2A1L162 156 aa27.33■■□□□ 1.97
SLIT3-204ENST00000518140 CPLX1O14810 134 aa27.33■■□□□ 1.97
SLIT3-204ENST00000518140 DHX16O60231 1041 aaKnown RBP27.33■■□□□ 1.97
SLIT3-204ENST00000518140 NMT2O60551 498 aa27.33■■□□□ 1.97
SLIT3-204ENST00000518140 PCP11498 1178 aaKnown RBP27.33■■□□□ 1.97
SLIT3-204ENST00000518140 PTMSP20962 102 aa27.33■■□□□ 1.97
SLIT3-204ENST00000518140 SCN9AQ15858 1988 aa27.33■■□□□ 1.97
SLIT3-204ENST00000518140 STRIP1Q5VSL9 837 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 MTA3Q9BTC8 594 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 DDX49Q9Y6V7 483 aaKnown RBP27.32■■□□□ 1.96
SLIT3-204ENST00000518140 FLT1P17948 1338 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 GOLGA8AA7E2F4 631 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 PPIP5K2O43314 1243 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 SLC3A2P08195 630 aaKnown RBP27.32■■□□□ 1.96
SLIT3-204ENST00000518140 PDIA4P13667 645 aaKnown RBP27.32■■□□□ 1.96
SLIT3-204ENST00000518140 PLCG2P16885 1265 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 GUCY1B3Q02153 619 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 USP48Q86UV5 1035 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 CERS3Q8IU89 383 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 KIAA0825Q8IV33 1275 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 SLC44A5Q8NCS7 719 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 CHMP4CQ96CF2 233 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 MTFR1LQ9H019 292 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 PCDHAC2Q9Y5I4 1007 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 TCHHQ07283 1943 aa27.32■■□□□ 1.96
SLIT3-204ENST00000518140 YDJCA8MPS7 323 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 H3BQV1 296 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 POLR3DP05423 398 aaPredicted RBP27.31■■□□□ 1.96
SLIT3-204ENST00000518140 SKOR2Q2VWA4 1001 aaPredicted RBP27.31■■□□□ 1.96
SLIT3-204ENST00000518140 IFFO2Q5TF58 517 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 ORC3Q9UBD5 711 aaPredicted RBP27.31■■□□□ 1.96
SLIT3-204ENST00000518140 PDE4BQ07343 736 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 NTRK3Q16288 839 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 CCDC93Q567U6 631 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 GPT2Q8TD30 523 aa27.31■■□□□ 1.96
SLIT3-204ENST00000518140 USP17L3A6NCW0 530 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 USP17L4A6NCW7 530 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 OTUD7BQ6GQQ9 843 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 USP17L1Q7RTZ2 530 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 TMTC2Q8N394 836 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 SUPT20HQ8NEM7 779 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 PHKBQ93100 1093 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 GJB4Q9NTQ9 266 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 ATP6V1DQ9Y5K8 247 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 DLEC1Q9Y238 1755 aa27.3■■□□□ 1.96
SLIT3-204ENST00000518140 LAMB1P07942 1786 aa27.29■■□□□ 1.96
SLIT3-204ENST00000518140 APOBEC3HQ6NTF7 200 aaKnown RBP27.29■■□□□ 1.96
SLIT3-204ENST00000518140 CDK5RAP2Q96SN8 1893 aa27.29■■□□□ 1.96
SLIT3-204ENST00000518140 GADD45BO75293 160 aaPredicted RBP27.29■■□□□ 1.96
SLIT3-204ENST00000518140 NCLP19338 710 aaKnown RBP27.29■■□□□ 1.96
SLIT3-204ENST00000518140 SYNE3Q6ZMZ3 975 aa27.29■■□□□ 1.96
SLIT3-204ENST00000518140 ZNF654Q8IZM8 581 aa27.29■■□□□ 1.96
SLIT3-204ENST00000518140 UPF1Q92900 1129 aaKnown RBP eCLIP27.29■■□□□ 1.96
SLIT3-204ENST00000518140 ZNF277Q9NRM2 450 aaPredicted RBP27.29■■□□□ 1.96
SLIT3-204ENST00000518140 FSD2A1L4K1 749 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 POLD1P28340 1107 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 RESTQ13127 1097 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 PICALMQ13492 652 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 IQCA1Q86XH1 822 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 RTKN2Q8IZC4 609 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 DDX4Q9NQI0 724 aaKnown RBP27.28■■□□□ 1.96
SLIT3-204ENST00000518140 USP40Q9NVE5 1235 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 PPP1R1BQ9UD71 204 aaPredicted RBP27.28■■□□□ 1.96
SLIT3-204ENST00000518140 UBE2Q2LH0YL09 131 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 WDHD1O75717 1129 aaPredicted RBP27.28■■□□□ 1.96
SLIT3-204ENST00000518140 CRKP46108 304 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 KLHL40Q2TBA0 621 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 HHIPL2Q6UWX4 724 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 NUP133Q8WUM0 1156 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 TEKT1Q969V4 418 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 AIFM3Q96NN9 605 aa27.28■■□□□ 1.96
SLIT3-204ENST00000518140 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
SLIT3-204ENST00000518140 CDC42EP5Q6NZY7 148 aa27.27■■□□□ 1.96
SLIT3-204ENST00000518140 CMTR1Q8N1G2 835 aaKnown RBP27.27■■□□□ 1.96
SLIT3-204ENST00000518140 KIF3AQ9Y496 699 aa27.27■■□□□ 1.96
SLIT3-204ENST00000518140 ROBO3Q96MS0 1386 aa27.27■■□□□ 1.96
SLIT3-204ENST00000518140 PSDA5PKW4 1024 aaPredicted RBP27.26■■□□□ 1.95
SLIT3-204ENST00000518140 GOLGA6L3A6NEY3 463 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 FIBPO43427 364 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 TGFB2P61812 414 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 TFAP4Q01664 338 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 IFIT1BQ5T764 474 aaKnown RBP27.26■■□□□ 1.95
SLIT3-204ENST00000518140 AMOTL1Q8IY63 956 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 MKNK2Q9HBH9 465 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 PIM2Q9P1W9 311 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 TSPY2A6NKD2 308 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 PSMD1Q99460 953 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 NAV1Q8NEY1 1877 aa27.26■■□□□ 1.95
SLIT3-204ENST00000518140 KIF13BQ9NQT8 1826 aa27.25■■□□□ 1.95
SLIT3-204ENST00000518140 FKBP1AP62942 108 aaKnown RBP27.25■■□□□ 1.95
SLIT3-204ENST00000518140 FANCBQ8NB91 859 aa27.25■■□□□ 1.95
SLIT3-204ENST00000518140 IL17RBQ9NRM6 502 aa27.25■■□□□ 1.95
SLIT3-204ENST00000518140 TFIP11Q9UBB9 837 aaKnown RBP27.25■■□□□ 1.95
SLIT3-204ENST00000518140 RTN1Q16799 776 aa27.25■■□□□ 1.95
SLIT3-204ENST00000518140 RCSD1Q6JBY9 416 aa27.24■■□□□ 1.95
SLIT3-204ENST00000518140 CCDC82Q8N4S0 544 aa27.24■■□□□ 1.95
SLIT3-204ENST00000518140 TAOK2Q9UL54 1235 aa27.24■■□□□ 1.95
SLIT3-204ENST00000518140 NID2Q14112 1375 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms