RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 NBR1Q14596 966 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 NAA16Q6N069 864 aaPredicted RBP9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 FTSJ3Q8IY81 847 aaKnown RBP9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ZNF280CQ8ND82 737 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 MEIS3Q99687 375 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TBC1D2Q9BYX2 928 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 AGTPBP1Q9UPW5 1226 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 AFG3L2Q9Y4W6 797 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ZNF521Q96K83 1311 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 DDTLA6NHG4 134 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SGPL1O95470 568 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 HLA-DOAP06340 250 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CAP1Q01518 475 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GPAT2Q6NUI2 795 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 NECAB2Q7Z6G3 386 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CLUAP1Q96AJ1 413 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 UNC93B1Q9H1C4 597 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 DHX36Q9H2U1 1008 aaKnown RBP9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PI4KBQ9UBF8 816 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GABRQQ9UN88 632 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CENPFP49454 3210 aa9.03□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GPR75-ASB3A0A0A6YYF3 556 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PHF20L1A8MW92 1017 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 BCRP11274 1271 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FXR1P51114 621 aaKnown RBP eCLIP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 HMGCS2P54868 508 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 WDR78Q5VTH9 848 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CCDC84Q86UT8 332 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ARHGAP45Q92619 1136 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FEZ1Q99689 392 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 AATFQ9NY61 560 aaKnown RBP eCLIP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 HMG20BQ9P0W2 317 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 HERC5Q9UII4 1024 aaKnown RBP9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 GAKO14976 1311 aa9.02□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TBC1D12O60347 775 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SURF6O75683 361 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 GLRX3O76003 335 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ASNSP08243 561 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CTGFP29279 349 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 USP5P45974 858 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 RARSP54136 660 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 IRF5Q13568 498 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FAM110CQ1W6H9 321 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TGFBRAP1Q8WUH2 860 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 NSUN4Q96CB9 384 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 DDX4Q9NQI0 724 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SNRKQ9NRH2 765 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 RBM27Q9P2N5 1060 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 KIAA0100Q14667 2235 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PDS5AQ29RF7 1337 aaKnown RBP9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ECM29Q5VYK3 1845 aa9.01□□□□□ -0.97
TNFRSF11B-202ENST00000517352 HTTP42858 3142 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 HMGCRP04035 888 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CYP2B6P20813 491 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CAP2P40123 477 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MTMR2Q13614 643 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MOGSQ13724 837 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TREML2Q5T2D2 321 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ZKSCAN2Q63HK3 967 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MAPKAPK5Q8IW41 473 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 GPRC5AQ8NFJ5 357 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SH3RF3Q8TEJ3 882 aaPredicted RBP9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PAWRQ96IZ0 340 aaKnown RBP9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PAGR1Q9BTK6 254 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 NBPF3Q9H094 633 aa9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ASCC2Q9H1I8 757 aaPredicted RBP9□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 C19orf81C9J6K1 198 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 USP17L10C9JJH3 530 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 IDH1O75874 414 aaKnown RBP8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CCNA1P78396 465 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PI16Q6UXB8 463 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CERS3Q8IU89 383 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ITPRIPQ8IWB1 547 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 C7orf61Q8IZ16 206 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SOCS4Q8WXH5 440 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CABP5Q9NP86 173 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SAP30BPQ9UHR5 308 aaKnown RBP8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 AK9Q5TCS8 1911 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 RPTORQ8N122 1335 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms