RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TMEM57Q8N5G2 664 aa17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 BAG3O95817 575 aa17.93■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CCL5P13501 91 aa17.93■□□□□ 0.46
SCARNA20.5-201ENST00000516991 PABPC4Q13310 644 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CCDC158Q5M9N0 1113 aa17.93■□□□□ 0.46
SCARNA20.5-201ENST00000516991 TTC39AQ5SRH9 613 aa17.93■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SHISA4Q96DD7 197 aa17.93■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FAM196BA6NMK8 535 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 TNPO2O14787 897 aaKnown RBP17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CAPN2P17655 700 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 GJA8P48165 433 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 IRF5Q13568 498 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FAM110CQ1W6H9 321 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 TNNI3KQ59H18 835 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 NAA16Q6N069 864 aaPredicted RBP17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FTSJ3Q8IY81 847 aaKnown RBP17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 ZNF280CQ8ND82 737 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 DHX36Q9H2U1 1008 aaKnown RBP17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FPGT-TNNI3KV9GXZ4 949 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FOCADQ5VW36 1801 aa17.92■□□□□ 0.46
SCARNA20.5-201ENST00000516991 ADCY3O60266 1144 aa17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CAP2P40123 477 aa17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SH3RF3Q8TEJ3 882 aaPredicted RBP17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 ZNF512BQ96KM6 892 aaPredicted RBP17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 RNF208Q9H0X6 261 aa17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 AS3MTQ9HBK9 375 aa17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 PI4KBQ9UBF8 816 aa17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 GABRQQ9UN88 632 aa17.91■□□□□ 0.46
SCARNA20.5-201ENST00000516991 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 GCLCP48506 637 aaPredicted RBP17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 FLT3LGP49771 235 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 ATP8B2P98198 1209 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SPP2Q13103 211 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 PXYLP1Q8TE99 480 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 COA7Q96BR5 231 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 DBNDD2Q9BQY9 259 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 HTATIP2Q9BUP3 242 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SIPA1L1O43166 1804 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CDK5RAP2Q96SN8 1893 aa17.9■□□□□ 0.46
SCARNA20.5-201ENST00000516991 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
SCARNA20.5-201ENST00000516991 PPP4CP60510 307 aa17.89■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TREML2Q5T2D2 321 aa17.89■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ANKRD13CQ8N6S4 541 aa17.89■□□□□ 0.45
SCARNA20.5-201ENST00000516991 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
SCARNA20.5-201ENST00000516991 AATFQ9NY61 560 aaKnown RBP eCLIP17.89■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ASNSP08243 561 aa17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 HMGCS2P54868 508 aa17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 SH3D19Q5HYK7 790 aa17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 GINM1Q9NU53 330 aa17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
SCARNA20.5-201ENST00000516991 H0YGN5 161 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 FARP2O94887 1054 aaPredicted RBP17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 INHAP05111 366 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 CERS3Q8IU89 383 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 U2AF1L4Q8WU68 220 aaKnown RBP17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 WDR18Q9BV38 432 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 UNC93B1Q9H1C4 597 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 FLT1P17948 1338 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 DOCK3Q8IZD9 2030 aa17.87■□□□□ 0.45
SCARNA20.5-201ENST00000516991 MYO5AQ9Y4I1 1855 aaKnown RBP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TRIOBPQ9H2D6 2365 aa17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ELNP15502 786 aa17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 METTL16Q86W50 562 aaKnown RBP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 FOXP4Q8IVH2 680 aaPredicted RBP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 CRACR2BQ8N4Y2 399 aaPredicted RBP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TGFBRAP1Q8WUH2 860 aa17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 DPF3Q92784 378 aa17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ASCC2Q9H1I8 757 aaPredicted RBP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 COLQQ9Y215 455 aaPredicted RBP17.86■□□□□ 0.45
SCARNA20.5-201ENST00000516991 SGPL1O95470 568 aa17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 HLA-DOAP06340 250 aa17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ZAP70P43403 619 aa17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 FXR1P51114 621 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 RRP1BQ14684 758 aaKnown RBP17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TMED8Q6PL24 325 aaPredicted RBP17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 MAPKAPK5Q8IW41 473 aa17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 C1orf115Q9H7X2 142 aa17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TMOD4Q9NZQ9 345 aa17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 DBNLQ9UJU6 430 aaKnown RBP17.85■□□□□ 0.45
SCARNA20.5-201ENST00000516991 MTMR2Q13614 643 aa17.84■□□□□ 0.45
SCARNA20.5-201ENST00000516991 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
SCARNA20.5-201ENST00000516991 MORF4L1Q9UBU8 362 aa17.84■□□□□ 0.45
SCARNA20.5-201ENST00000516991 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
SCARNA20.5-201ENST00000516991 NR2E3Q9Y5X4 410 aa17.84■□□□□ 0.45
SCARNA20.5-201ENST00000516991 MYH1P12882 1939 aa17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 C19orf81C9J6K1 198 aa17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 BACE1P56817 501 aa17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 ADGRA1Q86SQ6 560 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms