RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PPP1R12BO60237 982 aaPredicted RBP1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 MICAL2O94851 1124 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 ACPPP15309 386 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 VIPR1P32241 457 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 C21orf58P58505 322 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 PLCB3Q01970 1234 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 IKBKEQ14164 716 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 VWA3BQ502W6 1294 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 COLEC12Q5KU26 742 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 PDGFDQ9GZP0 370 aaPredicted RBP1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 DMRT1Q9Y5R6 373 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 OR14I1A6ND48 311 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 IGF2BP3O00425 579 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 NARSO43776 548 aaKnown RBP1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 KIF4AO95239 1232 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 ZNF37AP17032 561 aaPredicted RBP1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 RASA1P20936 1047 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 SCNN1AP37088 669 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 GSTM4Q03013 218 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 PSME1Q06323 249 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 R3HDM1Q15032 1099 aaKnown RBP1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 LCE3AQ5TA76 89 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 VN1R5Q7Z5H4 357 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 LILRA2Q8N149 483 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 PLPP7Q8NBV4 271 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 PPP1R13LQ8WUF5 828 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 NEU4Q8WWR8 484 aaPredicted RBP1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 BBC3Q96PG8 261 aaPredicted RBP1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 PRDM14Q9GZV8 571 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 CD248Q9HCU0 757 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 RAD18Q9NS91 495 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 GTF2IRD1Q9UHL9 959 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 PPP1R9AQ9ULJ8 1098 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 TACC3Q9Y6A5 838 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 CNTNAP2Q9UHC6 1331 aa1.4□□□□□ -2.19
RNU6-539P-201ENST00000516665 GNAT3A8MTJ3 354 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 TRPA1O75762 1119 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 BMP5P22003 454 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 CEBPAP49715 358 aaPredicted RBP1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 GJA9P57773 515 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 TRIP4Q15650 581 aaPredicted RBP1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 ADGRF1Q5T601 910 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 CDKAL1Q5VV42 579 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 PEAR1Q5VY43 1037 aaPredicted RBP1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 NLRP13Q86W25 1043 aa1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 PROCA1Q8NCQ7 364 aaPredicted RBP1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 C2orf49Q9BVC5 232 aaPredicted RBP1.39□□□□□ -2.19
RNU6-539P-201ENST00000516665 NFKBIEO00221 500 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 ECEL1O95672 775 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 CYP2E1P05181 493 aaPredicted RBP1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 CDK4P11802 303 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 MAOBP27338 520 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 LIMS1P48059 325 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 GTF2IP78347 998 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 CAP1Q01518 475 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 FOXE3Q13461 319 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 LARP1Q6PKG0 1096 aaKnown RBP1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 NCAPG2Q86XI2 1143 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 SMYD4Q8IYR2 804 aaPredicted RBP1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 SOX17Q9H6I2 414 aaPredicted RBP1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 PIDD1Q9HB75 910 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 GPR160Q9UJ42 338 aa1.38□□□□□ -2.19
RNU6-539P-201ENST00000516665 A0A0A6YYK5 440 aaPredicted RBP1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 PRR33A8MZF0 331 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 HRKO00198 91 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 MCM7P33993 719 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 NCKAP1LP55160 1127 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 DAB2P98082 770 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 COL10A1Q03692 680 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 MIIPQ5JXC2 388 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 PDZD8Q8NEN9 1154 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 PTGFRNQ9P2B2 879 aa1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.37□□□□□ -2.19
RNU6-539P-201ENST00000516665 BUB1BO60566 1050 aaPredicted RBP1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 DGKZQ13574 1117 aa1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 MAP7D1Q3KQU3 841 aa1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 GLB1LQ6UWU2 654 aa1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 SIRT2Q8IXJ6 389 aa1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 ZBTB8BQ8NAP8 495 aaPredicted RBP1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 PIWIL2Q8TC59 973 aaKnown RBP1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 ZNF526Q8TF50 670 aaPredicted RBP1.36□□□□□ -2.19
RNU6-539P-201ENST00000516665 RBAK-RBAKDNI3L0D1 243 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 PDE2AO00408 941 aaPredicted RBP1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 MUSKO15146 869 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 TMPRSS2O15393 492 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 ESR1P03372 595 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 ESRRAP11474 423 aaPredicted RBP1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 SDHBP21912 280 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 PDE3BQ13370 1112 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 KLHL22Q53GT1 634 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 MRGPRGQ86SM5 289 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 LDHDQ86WU2 507 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 CHMP7Q8WUX9 453 aaPredicted RBP1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 ZNF503Q96F45 646 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 WDR18Q9BV38 432 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 RSPH6AQ9H0K4 717 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 SUSD2Q9UGT4 822 aa1.35□□□□□ -2.19
RNU6-539P-201ENST00000516665 FITM1A5D6W6 292 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 FAM155AB1AL88 458 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms