RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PCDHA4Q9UN74 947 aa7.52□□□□□ -1.21
LINC01088-211ENST00000515597 SPACA3Q8IXA5 215 aa7.51□□□□□ -1.21
LINC01088-211ENST00000515597 CEP44Q9C0F1 390 aa7.51□□□□□ -1.21
LINC01088-211ENST00000515597 GTF2IRD1Q9UHL9 959 aa7.51□□□□□ -1.21
LINC01088-211ENST00000515597 PPM1HQ9ULR3 514 aa7.51□□□□□ -1.21
LINC01088-211ENST00000515597 SAMM50Q9Y512 469 aa7.51□□□□□ -1.21
LINC01088-211ENST00000515597 RING1Q06587 406 aa7.5□□□□□ -1.21
LINC01088-211ENST00000515597 KCNA1Q09470 495 aa7.5□□□□□ -1.21
LINC01088-211ENST00000515597 ZNF124Q15973 351 aa7.5□□□□□ -1.21
LINC01088-211ENST00000515597 SRCIN1Q9C0H9 1055 aa7.5□□□□□ -1.21
LINC01088-211ENST00000515597 IKZF1Q13422 519 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 PCNX4Q63HM2 1172 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 SLC23A3Q6PIS1 610 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 ARMCX6Q7L4S7 300 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 ELMO3Q96BJ8 720 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 SNX11Q9Y5W9 270 aa7.49□□□□□ -1.21
LINC01088-211ENST00000515597 PRAMEF27A3QJZ7 478 aa7.48□□□□□ -1.21
LINC01088-211ENST00000515597 IGF2BP3O00425 579 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC01088-211ENST00000515597 FANCGO15287 622 aa7.48□□□□□ -1.21
LINC01088-211ENST00000515597 EOMESO95936 686 aa7.48□□□□□ -1.21
LINC01088-211ENST00000515597 PTPN11Q06124 597 aaPredicted RBP7.48□□□□□ -1.21
LINC01088-211ENST00000515597 NKPD1Q17RQ9 610 aa7.48□□□□□ -1.21
LINC01088-211ENST00000515597 CDC37L1Q7L3B6 337 aa7.48□□□□□ -1.21
LINC01088-211ENST00000515597 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
LINC01088-211ENST00000515597 GNAT3A8MTJ3 354 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 USP17L7P0C7H9 530 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 ZP2Q05996 745 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 INPP5AQ14642 412 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 LRRC14Q15048 493 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 ALG1LQ6GMV1 187 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 LRFN4Q6PJG9 635 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 ASB16Q96NS5 453 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 FBRSQ9HAH7 460 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
LINC01088-211ENST00000515597 ATP2B2Q01814 1243 aa7.46□□□□□ -1.22
LINC01088-211ENST00000515597 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
LINC01088-211ENST00000515597 FLAD1Q8NFF5 587 aa7.46□□□□□ -1.22
LINC01088-211ENST00000515597 C12orf49Q9H741 205 aa7.46□□□□□ -1.22
LINC01088-211ENST00000515597 PRDM5Q9NQX1 630 aaPredicted RBP7.46□□□□□ -1.22
LINC01088-211ENST00000515597 PITPNM2Q9BZ72 1349 aa7.46□□□□□ -1.22
LINC01088-211ENST00000515597 RBAK-RBAKDNI3L0D1 243 aa7.45□□□□□ -1.22
LINC01088-211ENST00000515597 FARP2O94887 1054 aaPredicted RBP7.45□□□□□ -1.22
LINC01088-211ENST00000515597 P4HBP07237 508 aaKnown RBP7.45□□□□□ -1.22
LINC01088-211ENST00000515597 CDK8P49336 464 aa7.45□□□□□ -1.22
LINC01088-211ENST00000515597 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
LINC01088-211ENST00000515597 GAL3ST3Q96A11 431 aa7.45□□□□□ -1.22
LINC01088-211ENST00000515597 PLPPR2Q96GM1 343 aa7.45□□□□□ -1.22
LINC01088-211ENST00000515597 SPG7Q9UQ90 795 aa7.45□□□□□ -1.22
LINC01088-211ENST00000515597 PRR33A8MZF0 331 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 GIPC1O14908 333 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 SLITRK5O94991 958 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 CLCN7P51798 805 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 ZSWIM9Q86XI8 627 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 KCT2Q8NC54 265 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 ANKRD24Q8TF21 1146 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 MIPEPQ99797 713 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC01088-211ENST00000515597 FAM8A1Q9UBU6 413 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 CYP8B1Q9UNU6 501 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 TTF2Q9UNY4 1162 aaKnown RBP7.44□□□□□ -1.22
LINC01088-211ENST00000515597 MAPK8IP1Q9UQF2 711 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 CNTNAP4Q9C0A0 1308 aa7.44□□□□□ -1.22
LINC01088-211ENST00000515597 PATL2C9JE40 543 aaKnown RBP7.43□□□□□ -1.22
LINC01088-211ENST00000515597 LRIG2O94898 1065 aa7.43□□□□□ -1.22
LINC01088-211ENST00000515597 NKG7Q16617 165 aa7.43□□□□□ -1.22
LINC01088-211ENST00000515597 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
LINC01088-211ENST00000515597 CYFIP1Q7L576 1253 aa7.43□□□□□ -1.22
LINC01088-211ENST00000515597 ZNF507Q8TCN5 953 aa7.43□□□□□ -1.22
LINC01088-211ENST00000515597 CTNND2Q9UQB3 1225 aa7.43□□□□□ -1.22
LINC01088-211ENST00000515597 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC01088-211ENST00000515597 CDKAL1Q5VV42 579 aa7.42□□□□□ -1.22
LINC01088-211ENST00000515597 SCARA3Q6AZY7 606 aa7.42□□□□□ -1.22
LINC01088-211ENST00000515597 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
LINC01088-211ENST00000515597 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
LINC01088-211ENST00000515597 CARS2Q9HA77 564 aaKnown RBP7.42□□□□□ -1.22
LINC01088-211ENST00000515597 ATP13A1Q9HD20 1204 aa7.42□□□□□ -1.22
LINC01088-211ENST00000515597 TPX2Q9ULW0 747 aaKnown RBP7.42□□□□□ -1.22
LINC01088-211ENST00000515597 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 LRRC10BA6NIK2 292 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 FAM155AB1AL88 458 aaPredicted RBP7.41□□□□□ -1.22
LINC01088-211ENST00000515597 LDHBP07195 334 aaKnown RBP7.41□□□□□ -1.22
LINC01088-211ENST00000515597 ETF1P62495 437 aaKnown RBP7.41□□□□□ -1.22
LINC01088-211ENST00000515597 FGD1P98174 961 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 FYB2Q5VWT5 728 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 HDXQ7Z353 690 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 MFSD4AQ8N468 514 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 SEMA3GQ9NS98 782 aa7.41□□□□□ -1.22
LINC01088-211ENST00000515597 H3BS24 57 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 PKN1Q16512 942 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 MLANAQ16655 118 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 SFRP5Q5T4F7 317 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 TTBK2Q6IQ55 1244 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 SV2BQ7L1I2 683 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 XAGE3Q8WTP9 111 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms