RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 U2AF1L4Q8WU68 220 aaKnown RBP18.52■□□□□ 0.56
DDR1-278ENST00000515233 RAI14Q9P0K7 980 aa18.52■□□□□ 0.56
DDR1-278ENST00000515233 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.52■□□□□ 0.56
DDR1-278ENST00000515233 FAM196BA6NMK8 535 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 CAP2P40123 477 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 MCAMP43121 646 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 SPP2Q13103 211 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 FAM110CQ1W6H9 321 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 TREML2Q5T2D2 321 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 ANKRD13CQ8N6S4 541 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 UNC93B1Q9H1C4 597 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
DDR1-278ENST00000515233 HERC5Q9UII4 1024 aaKnown RBP18.51■□□□□ 0.55
DDR1-278ENST00000515233 SH3D19Q5HYK7 790 aa18.5■□□□□ 0.55
DDR1-278ENST00000515233 COA7Q96BR5 231 aa18.5■□□□□ 0.55
DDR1-278ENST00000515233 LRP2BPQ9P2M1 347 aa18.5■□□□□ 0.55
DDR1-278ENST00000515233 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 USP17L5A8MUK1 530 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 IGSF3O75054 1194 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 BCAR3O75815 825 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 ELNP15502 786 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 GCLCP48506 637 aaPredicted RBP18.49■□□□□ 0.55
DDR1-278ENST00000515233 PABPC4Q13310 644 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDR1-278ENST00000515233 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
DDR1-278ENST00000515233 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
DDR1-278ENST00000515233 PI4KBQ9UBF8 816 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
DDR1-278ENST00000515233 INHAP05111 366 aa18.48■□□□□ 0.55
DDR1-278ENST00000515233 PPP4CP60510 307 aa18.48■□□□□ 0.55
DDR1-278ENST00000515233 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
DDR1-278ENST00000515233 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
DDR1-278ENST00000515233 NOL10Q9BSC4 688 aaKnown RBP18.48■□□□□ 0.55
DDR1-278ENST00000515233 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
DDR1-278ENST00000515233 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
DDR1-278ENST00000515233 ATAD5Q96QE3 1844 aa18.48■□□□□ 0.55
DDR1-278ENST00000515233 LOC285556D6RIA3 1793 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 FARP2O94887 1054 aaPredicted RBP18.47■□□□□ 0.55
DDR1-278ENST00000515233 BAG3O95817 575 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 HMGCS2P54868 508 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 POLA2Q14181 598 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
DDR1-278ENST00000515233 SH3RF3Q8TEJ3 882 aaPredicted RBP18.47■□□□□ 0.55
DDR1-278ENST00000515233 CLUAP1Q96AJ1 413 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 WDR18Q9BV38 432 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 AS3MTQ9HBK9 375 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
DDR1-278ENST00000515233 CEP290O15078 2479 aa18.47■□□□□ 0.55
DDR1-278ENST00000515233 TFRCP02786 760 aaKnown RBP18.46■□□□□ 0.55
DDR1-278ENST00000515233 PLCG2P16885 1265 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 NAA16Q6N069 864 aaPredicted RBP18.46■□□□□ 0.55
DDR1-278ENST00000515233 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
DDR1-278ENST00000515233 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 ZNF512BQ96KM6 892 aaPredicted RBP18.46■□□□□ 0.55
DDR1-278ENST00000515233 DEFB118Q96PH6 123 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 PRO3102Q9H379 93 aa18.46■□□□□ 0.55
DDR1-278ENST00000515233 ASNSP08243 561 aa18.45■□□□□ 0.54
DDR1-278ENST00000515233 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
DDR1-278ENST00000515233 ZKSCAN2Q63HK3 967 aa18.45■□□□□ 0.54
DDR1-278ENST00000515233 ASCC2Q9H1I8 757 aaPredicted RBP18.45■□□□□ 0.54
DDR1-278ENST00000515233 AATFQ9NY61 560 aaKnown RBP eCLIP18.45■□□□□ 0.54
DDR1-278ENST00000515233 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
DDR1-278ENST00000515233 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
DDR1-278ENST00000515233 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
DDR1-278ENST00000515233 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
DDR1-278ENST00000515233 HOXA7P31268 230 aaPredicted RBP18.44■□□□□ 0.54
DDR1-278ENST00000515233 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
DDR1-278ENST00000515233 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
DDR1-278ENST00000515233 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
DDR1-278ENST00000515233 SNRKQ9NRH2 765 aa18.44■□□□□ 0.54
DDR1-278ENST00000515233 GINM1Q9NU53 330 aa18.44■□□□□ 0.54
DDR1-278ENST00000515233 MORF4L1Q9UBU8 362 aa18.44■□□□□ 0.54
DDR1-278ENST00000515233 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
DDR1-278ENST00000515233 BACE1P56817 501 aa18.43■□□□□ 0.54
DDR1-278ENST00000515233 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
DDR1-278ENST00000515233 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
DDR1-278ENST00000515233 SIPA1L1O43166 1804 aa18.43■□□□□ 0.54
DDR1-278ENST00000515233 ADGRA1Q86SQ6 560 aa18.42■□□□□ 0.54
DDR1-278ENST00000515233 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.549e-6■■■■■ 32.4
DDR1-278ENST00000515233 DNAJC18Q9H819 358 aa18.42■□□□□ 0.54
DDR1-278ENST00000515233 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
DDR1-278ENST00000515233 FOCADQ5VW36 1801 aa18.42■□□□□ 0.54
DDR1-278ENST00000515233 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 TRIOBPQ9H2D6 2365 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 MAST2Q6P0Q8 1798 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 EVI5O60447 810 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 SURF6O75683 361 aaKnown RBP18.41■□□□□ 0.54
DDR1-278ENST00000515233 HMGCRP04035 888 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 JAG1P78504 1218 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 MTMR2Q13614 643 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 MAPKAPK5Q8IW41 473 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 ANKLE1Q8NAG6 615 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 FLT1P17948 1338 aa18.41■□□□□ 0.54
DDR1-278ENST00000515233 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms