RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
SH3D19-209ENST00000514013 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 LDHAL6AQ6ZMR3 332 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 FAM83AQ86UY5 434 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.53□□□□□ -0.56
SH3D19-209ENST00000514013 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 DNAAF4Q8WXU2 420 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 ZNF112Q9UJU3 913 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
SH3D19-209ENST00000514013 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
SH3D19-209ENST00000514013 RPAP1Q9BWH6 1393 aaPredicted RBP11.53□□□□□ -0.56
SH3D19-209ENST00000514013 TEKT1Q969V4 418 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 ZDHHC15Q96MV8 337 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 GUCD1Q96NT3 240 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.57
SH3D19-209ENST00000514013 STK31Q9BXU1 1019 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 ZNF341Q9BYN7 854 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
SH3D19-209ENST00000514013 F6X3S4 739 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
SH3D19-209ENST00000514013 NFIAQ12857 509 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 TRIM32Q13049 653 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 IRF5Q13568 498 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 FKBP1CQ5VVH2 108 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 DCAF15Q66K64 600 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 FBXO33Q7Z6M2 555 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 TDHQ8IZJ6 230 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 ANKK1Q8NFD2 765 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
SH3D19-209ENST00000514013 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.51□□□□□ -0.57
SH3D19-209ENST00000514013 PPP1R3GB7ZBB8 358 aa11.5□□□□□ -0.57
SH3D19-209ENST00000514013 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
SH3D19-209ENST00000514013 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
SH3D19-209ENST00000514013 FKBP5Q13451 457 aaPredicted RBP11.5□□□□□ -0.57
SH3D19-209ENST00000514013 TWISTNBQ3B726 338 aaPredicted RBP11.5□□□□□ -0.57
SH3D19-209ENST00000514013 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
SH3D19-209ENST00000514013 ATRNL1Q5VV63 1379 aa11.5□□□□□ -0.57
SH3D19-209ENST00000514013 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
SH3D19-209ENST00000514013 TNPO2O14787 897 aaKnown RBP11.49□□□□□ -0.57
SH3D19-209ENST00000514013 TCP10Q12799 353 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 BEND3Q5T5X7 828 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 ZFPM1Q8IX07 1006 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 TMOD2Q9NZR1 351 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
SH3D19-209ENST00000514013 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
SH3D19-209ENST00000514013 A0A0G2JLL6 359 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-209ENST00000514013 CXCL11O14625 94 aa11.48□□□□□ -0.57
SH3D19-209ENST00000514013 TAF7LQ5H9L4 462 aa11.48□□□□□ -0.57
SH3D19-209ENST00000514013 PRRT2Q7Z6L0 340 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-209ENST00000514013 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-209ENST00000514013 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
SH3D19-209ENST00000514013 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
SH3D19-209ENST00000514013 UBE2OQ9C0C9 1292 aaKnown RBP11.48□□□□□ -0.57
SH3D19-209ENST00000514013 FAM198AQ9UFP1 575 aa11.48□□□□□ -0.57
SH3D19-209ENST00000514013 PFASO15067 1338 aa11.48□□□□□ -0.57
SH3D19-209ENST00000514013 MGAMO43451 1857 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 PHF20L1A8MW92 1017 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 PROX2Q3B8N5 592 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 FAM161BQ96MY7 647 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 MRIQ9BWK5 157 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 ZHX2Q9Y6X8 837 aa11.47□□□□□ -0.57
SH3D19-209ENST00000514013 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
SH3D19-209ENST00000514013 MUC3AQ02505 3323 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 GRM8O00222 908 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 LRRC24Q50LG9 513 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 GADL1Q6ZQY3 521 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 ANKRD13CQ8N6S4 541 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 VGLL2Q8N8G2 317 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
SH3D19-209ENST00000514013 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
SH3D19-209ENST00000514013 DAGLAQ9Y4D2 1042 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 AFG3L2Q9Y4W6 797 aa11.46□□□□□ -0.57
SH3D19-209ENST00000514013 PTPRAP18433 802 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 TREML2Q5T2D2 321 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 SH3BP5LQ7L8J4 393 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 SUCLG2Q96I99 432 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 C11orf49Q9H6J7 331 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 GJD2Q9UKL4 321 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 DDX60LQ5H9U9 1706 aaKnown RBP11.45□□□□□ -0.58
SH3D19-209ENST00000514013 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
SH3D19-209ENST00000514013 FRAT2O75474 233 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-209ENST00000514013 HMGCRP04035 888 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 COL6A1P12109 1028 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 CAPN2P17655 700 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-209ENST00000514013 FASTKD5Q7L8L6 764 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms