RNA–Protein interactions for RNA: ENST00000513496.5

FBXO4-207, Transcript of F-box protein 4, humanhuman

TSL 3

Gene FBXO4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-207ENST00000513496 SMCR8Q8TEV9 937 aaPredicted RBP17.1■□□□□ 0.33
FBXO4-207ENST00000513496 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
FBXO4-207ENST00000513496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.1■□□□□ 0.33
FBXO4-207ENST00000513496 BIN2Q9UBW5 565 aaPredicted RBP17.1■□□□□ 0.33
FBXO4-207ENST00000513496 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 UQCRFS1P1P0C7P4 283 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 CAPN2P17655 700 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 MCAMP43121 646 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
FBXO4-207ENST00000513496 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
FBXO4-207ENST00000513496 UNC93B1Q9H1C4 597 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 PNMA3Q9UL41 463 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
FBXO4-207ENST00000513496 PLXNB2O15031 1838 aa17.08■□□□□ 0.33
FBXO4-207ENST00000513496 TNPO2O14787 897 aaKnown RBP17.08■□□□□ 0.32
FBXO4-207ENST00000513496 SGPL1O95470 568 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 CAP2P40123 477 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 SPP2Q13103 211 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 RRP1BQ14684 758 aaKnown RBP17.08■□□□□ 0.32
FBXO4-207ENST00000513496 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 ZNF280CQ8ND82 737 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 GPR108Q9NPR9 543 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 ALPK3Q96L96 1907 aa17.08■□□□□ 0.32
FBXO4-207ENST00000513496 BCAR3O75815 825 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 INHAP05111 366 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 ELNP15502 786 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 TEX11Q8IYF3 940 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 ANKRD13CQ8N6S4 541 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 DPF3Q92784 378 aa17.07■□□□□ 0.32
FBXO4-207ENST00000513496 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
FBXO4-207ENST00000513496 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
FBXO4-207ENST00000513496 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
FBXO4-207ENST00000513496 PPP4CP60510 307 aa17.06■□□□□ 0.32
FBXO4-207ENST00000513496 POLA2Q14181 598 aa17.06■□□□□ 0.32
FBXO4-207ENST00000513496 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
FBXO4-207ENST00000513496 COA7Q96BR5 231 aa17.06■□□□□ 0.32
FBXO4-207ENST00000513496 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
FBXO4-207ENST00000513496 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
FBXO4-207ENST00000513496 MYH1P12882 1939 aa17.06■□□□□ 0.32
FBXO4-207ENST00000513496 USP17L5A8MUK1 530 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 IGSF3O75054 1194 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 PABPC4Q13310 644 aaKnown RBP eCLIP17.05■□□□□ 0.32
FBXO4-207ENST00000513496 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
FBXO4-207ENST00000513496 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
FBXO4-207ENST00000513496 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 PI4KBQ9UBF8 816 aa17.05■□□□□ 0.32
FBXO4-207ENST00000513496 BAG3O95817 575 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 PLCG2P16885 1265 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 HMGCS2P54868 508 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 TNNI3KQ59H18 835 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
FBXO4-207ENST00000513496 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 ZNF512BQ96KM6 892 aaPredicted RBP17.04■□□□□ 0.32
FBXO4-207ENST00000513496 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 AS3MTQ9HBK9 375 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 FPGT-TNNI3KV9GXZ4 949 aa17.04■□□□□ 0.32
FBXO4-207ENST00000513496 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
FBXO4-207ENST00000513496 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
FBXO4-207ENST00000513496 DEFB118Q96PH6 123 aa17.03■□□□□ 0.32
FBXO4-207ENST00000513496 DBNDD2Q9BQY9 259 aa17.03■□□□□ 0.32
FBXO4-207ENST00000513496 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
FBXO4-207ENST00000513496 ASCC2Q9H1I8 757 aaPredicted RBP17.03■□□□□ 0.32
FBXO4-207ENST00000513496 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
FBXO4-207ENST00000513496 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
FBXO4-207ENST00000513496 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
FBXO4-207ENST00000513496 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
FBXO4-207ENST00000513496 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
FBXO4-207ENST00000513496 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
FBXO4-207ENST00000513496 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.32
FBXO4-207ENST00000513496 ASNSP08243 561 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 TTC39AQ5SRH9 613 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
FBXO4-207ENST00000513496 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 GJD2Q9UKL4 321 aa17.02■□□□□ 0.32
FBXO4-207ENST00000513496 RANBP2P49792 3224 aaKnown RBP17.02■□□□□ 0.32
FBXO4-207ENST00000513496 FLT1P17948 1338 aa17.01■□□□□ 0.31
FBXO4-207ENST00000513496 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
FBXO4-207ENST00000513496 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
FBXO4-207ENST00000513496 BACE1P56817 501 aa17.01■□□□□ 0.31
FBXO4-207ENST00000513496 JAG1P78504 1218 aa17.01■□□□□ 0.31
FBXO4-207ENST00000513496 NOP58Q9Y2X3 529 aaKnown RBP17.01■□□□□ 0.31
FBXO4-207ENST00000513496 HMGCRP04035 888 aa17■□□□□ 0.31
FBXO4-207ENST00000513496 MAPKAPK5Q8IW41 473 aa17■□□□□ 0.31
FBXO4-207ENST00000513496 TGFBRAP1Q8WUH2 860 aa17■□□□□ 0.31
FBXO4-207ENST00000513496 XRN2Q9H0D6 950 aaKnown RBP eCLIP17■□□□□ 0.31
FBXO4-207ENST00000513496 SZT2Q5T011 3432 aa16.99■□□□□ 0.31
FBXO4-207ENST00000513496 C19orf81C9J6K1 198 aa16.99■□□□□ 0.31
FBXO4-207ENST00000513496 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms