RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GREB1LQ9C091 1923 aaPredicted RBP9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 M0R2C6 588 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 ENTPD3O75355 529 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 CDC45O75419 566 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 WDHD1O75717 1129 aaPredicted RBP9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 TOMM70O94826 608 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 GNAT2P19087 354 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 CHMLP26374 656 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 MFAP1P55081 439 aaKnown RBP9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 MCMDC2Q4G0Z9 681 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 CASC1Q6TDU7 716 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 CWC27Q6UX04 472 aaKnown RBP9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 KRT26Q7Z3Y9 468 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 SEC62Q99442 399 aaKnown RBP9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 ARMT1Q9H993 441 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 SCUBE2Q9NQ36 999 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 CNTNAP1P78357 1384 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 ATRNL1Q5VV63 1379 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 PHIPQ8WWQ0 1821 aa9.1□□□□□ -0.95
HMGXB3-204ENST00000513318 FLT1P17948 1338 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 TCP10L2B9ZVM9 353 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 USP5P45974 858 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 CACNB3P54284 484 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 NFIAQ12857 509 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 PICALMQ13492 652 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 MAP1SQ66K74 1059 aaPredicted RBP9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 SMC1BQ8NDV3 1235 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 RBM46Q8TBY0 533 aaKnown RBP9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 FAM151AQ8WW52 585 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 DDRGK1Q96HY6 314 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 STRBPQ96SI9 672 aaKnown RBP9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 OSBPL5Q9H0X9 879 aaPredicted RBP9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 FAM198AQ9UFP1 575 aa9.09□□□□□ -0.95
HMGXB3-204ENST00000513318 ZMYM6O95789 1325 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 SGSM2O43147 1006 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 RASA3Q14644 834 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 GIMAP6Q6P9H5 292 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 CCDC129Q6ZRS4 1044 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 ZNF589Q86UQ0 364 aaPredicted RBP9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 SDR42E1Q8WUS8 393 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 GLIS2Q9BZE0 524 aaPredicted RBP9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 CRISPLD2Q9H0B8 497 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 DEFB129Q9H1M3 183 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 ATP8A2Q9NTI2 1148 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 SLC4A4Q9Y6R1 1079 aa9.08□□□□□ -0.96
HMGXB3-204ENST00000513318 GSG1L2A8MUP6 293 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 ADM5C9JUS6 153 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 PRKAB2O43741 272 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 NF2P35240 595 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 TCP10Q12799 353 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 FSTL1Q12841 308 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 MAPKAPK5Q8IW41 473 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 AMOTL1Q8IY63 956 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 HOOK2Q96ED9 719 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 ESYT1Q9BSJ8 1104 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 NACAP1Q9BZK3 213 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 TMEM39BQ9GZU3 492 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 IL25Q9H293 177 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 DHX36Q9H2U1 1008 aaKnown RBP9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 EPB41L4AQ9HCS5 686 aaPredicted RBP9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 ARPP21Q9UBL0 812 aaPredicted RBP9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 SCAF8Q9UPN6 1271 aaKnown RBP9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 SSC5DA1L4H1 1573 aa9.07□□□□□ -0.96
HMGXB3-204ENST00000513318 C2orf72A6NCS6 295 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 APPP05067 770 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 HLA-DOAP06340 250 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 HSPD1P10809 573 aaKnown RBP9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 TDO2P48775 406 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 SUPT20HL1Q3ZLR7 823 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 USP48Q86UV5 1035 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 IFNL3Q8IZI9 196 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 SLAIN1Q8ND83 568 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 TEPSINQ96N21 525 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 CSRNP1Q96S65 589 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 DSCC1Q9BVC3 393 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 NAPBQ9H115 298 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 MCM9Q9NXL9 1143 aa9.06□□□□□ -0.96
HMGXB3-204ENST00000513318 PASKQ96RG2 1323 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 ROBO3Q96MS0 1386 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 DDTLA6NHG4 134 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 TRAF5O00463 557 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 FOXP2O15409 715 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 POLR3DP05423 398 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 ALX1Q15699 326 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 VPS53Q5VIR6 699 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 DCAF15Q66K64 600 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 KIAA1211Q6ZU35 1233 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 TTC6Q86TZ1 520 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 EHD4Q9H223 541 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 GPHNQ9NQX3 736 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms