RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 DEFB118Q96PH6 123 aa19.69■□□□□ 0.74
DDR1-268ENST00000512694 NR2E3Q9Y5X4 410 aa19.69■□□□□ 0.74
DDR1-268ENST00000512694 PLXNB2O15031 1838 aa19.69■□□□□ 0.74
DDR1-268ENST00000512694 ZBTB22O15209 634 aa19.68■□□□□ 0.74
DDR1-268ENST00000512694 NEUROD6Q96NK8 337 aa19.68■□□□□ 0.74
DDR1-268ENST00000512694 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.74
DDR1-268ENST00000512694 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
DDR1-268ENST00000512694 SLC45A1Q9Y2W3 748 aa19.68■□□□□ 0.74
DDR1-268ENST00000512694 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.68■□□□□ 0.74
DDR1-268ENST00000512694 MAST2Q6P0Q8 1798 aa19.67■□□□□ 0.74
DDR1-268ENST00000512694 ZBTB7BO15156 539 aaPredicted RBP19.67■□□□□ 0.74
DDR1-268ENST00000512694 EVI5O60447 810 aa19.67■□□□□ 0.74
DDR1-268ENST00000512694 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
DDR1-268ENST00000512694 ZNF384Q8TF68 577 aa19.67■□□□□ 0.74
DDR1-268ENST00000512694 DDX60LQ5H9U9 1706 aaKnown RBP19.67■□□□□ 0.74
DDR1-268ENST00000512694 FOCADQ5VW36 1801 aa19.67■□□□□ 0.74
DDR1-268ENST00000512694 RHBDL3P58872 404 aa19.66■□□□□ 0.74
DDR1-268ENST00000512694 MAP3K10Q02779 954 aa19.66■□□□□ 0.74
DDR1-268ENST00000512694 G3BP1Q13283 466 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDR1-268ENST00000512694 TBC1D9Q6ZT07 1266 aa19.66■□□□□ 0.74
DDR1-268ENST00000512694 ITPRIPQ8IWB1 547 aa19.66■□□□□ 0.74
DDR1-268ENST00000512694 COA7Q96BR5 231 aa19.66■□□□□ 0.74
DDR1-268ENST00000512694 PDS5AQ29RF7 1337 aaKnown RBP19.66■□□□□ 0.74
DDR1-268ENST00000512694 MS4A1P11836 297 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 HMGCS2P54868 508 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 SPP2Q13103 211 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 IRF5Q13568 498 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 GORABQ5T7V8 394 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 DIS3LQ8TF46 1054 aaKnown RBP19.65■□□□□ 0.74
DDR1-268ENST00000512694 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
DDR1-268ENST00000512694 RAI14Q9P0K7 980 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 PNMA3Q9UL41 463 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
DDR1-268ENST00000512694 GPR75-ASB3A0A0A6YYF3 556 aa19.64■□□□□ 0.73
DDR1-268ENST00000512694 PXYLP1Q8TE99 480 aa19.64■□□□□ 0.73
DDR1-268ENST00000512694 PAWRQ96IZ0 340 aaKnown RBP19.64■□□□□ 0.73
DDR1-268ENST00000512694 HMG20BQ9P0W2 317 aa19.64■□□□□ 0.73
DDR1-268ENST00000512694 LAMA3Q16787 3333 aa19.64■□□□□ 0.73
DDR1-268ENST00000512694 COL6A3P12111 3177 aa19.63■□□□□ 0.73
DDR1-268ENST00000512694 FAM110CQ1W6H9 321 aa19.63■□□□□ 0.73
DDR1-268ENST00000512694 SPATA5Q8NB90 893 aa19.63■□□□□ 0.73
DDR1-268ENST00000512694 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.63■□□□□ 0.739e-6■■■■■ 32.4
DDR1-268ENST00000512694 PRO3102Q9H379 93 aa19.63■□□□□ 0.73
DDR1-268ENST00000512694 PAK6Q9NQU5 681 aaPredicted RBP19.63■□□□□ 0.73
DDR1-268ENST00000512694 PNMA6EA0A0J9YXQ4 647 aa19.62■□□□□ 0.73
DDR1-268ENST00000512694 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
DDR1-268ENST00000512694 RRP1BQ14684 758 aaKnown RBP19.62■□□□□ 0.73
DDR1-268ENST00000512694 TEX11Q8IYF3 940 aa19.62■□□□□ 0.73
DDR1-268ENST00000512694 PROCA1Q8NCQ7 364 aaPredicted RBP19.62■□□□□ 0.73
DDR1-268ENST00000512694 NSUN4Q96CB9 384 aaKnown RBP19.62■□□□□ 0.73
DDR1-268ENST00000512694 OSBPL5Q9H0X9 879 aaPredicted RBP19.62■□□□□ 0.73
DDR1-268ENST00000512694 STAP2Q9UGK3 403 aa19.62■□□□□ 0.73
DDR1-268ENST00000512694 MYH1P12882 1939 aa19.62■□□□□ 0.73
DDR1-268ENST00000512694 SOX1O00570 391 aaPredicted RBP19.61■□□□□ 0.73
DDR1-268ENST00000512694 TBC1D12O60347 775 aa19.61■□□□□ 0.73
DDR1-268ENST00000512694 GSTO1P78417 241 aa19.61■□□□□ 0.73
DDR1-268ENST00000512694 TRIM32Q13049 653 aa19.61■□□□□ 0.73
DDR1-268ENST00000512694 C7orf61Q8IZ16 206 aa19.61■□□□□ 0.73
DDR1-268ENST00000512694 ZNF280CQ8ND82 737 aa19.61■□□□□ 0.73
DDR1-268ENST00000512694 SH3RF3Q8TEJ3 882 aaPredicted RBP19.61■□□□□ 0.73
DDR1-268ENST00000512694 ASCC2Q9H1I8 757 aaPredicted RBP19.61■□□□□ 0.73
DDR1-268ENST00000512694 COL2A1P02458 1487 aaPredicted RBP19.6■□□□□ 0.73
DDR1-268ENST00000512694 PEX10O60683 326 aa19.6■□□□□ 0.73
DDR1-268ENST00000512694 LDHCP07864 332 aa19.6■□□□□ 0.73
DDR1-268ENST00000512694 LRCH3Q96II8 777 aa19.6■□□□□ 0.73
DDR1-268ENST00000512694 USP17L5A8MUK1 530 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 HMGCRP04035 888 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 CAP2P40123 477 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 MCAMP43121 646 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 MTMR2Q13614 643 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 SSH3Q8TE77 659 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 CRISPLD2Q9H0B8 497 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 SNRKQ9NRH2 765 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 LRP2BPQ9P2M1 347 aa19.59■□□□□ 0.73
DDR1-268ENST00000512694 ZMYND8Q9ULU4 1186 aaPredicted RBP19.59■□□□□ 0.73
DDR1-268ENST00000512694 FRMPD3Q5JV73 1810 aa19.58■□□□□ 0.73
DDR1-268ENST00000512694 UQCRFS1P1P0C7P4 283 aa19.58■□□□□ 0.72
DDR1-268ENST00000512694 ARID4AP29374 1257 aaPredicted RBP19.58■□□□□ 0.72
DDR1-268ENST00000512694 GCLCP48506 637 aaPredicted RBP19.58■□□□□ 0.72
DDR1-268ENST00000512694 ATP8B2P98198 1209 aa19.58■□□□□ 0.72
DDR1-268ENST00000512694 POLA2Q14181 598 aa19.58■□□□□ 0.72
DDR1-268ENST00000512694 SHROOM1Q2M3G4 852 aaPredicted RBP19.58■□□□□ 0.72
DDR1-268ENST00000512694 NECAB2Q7Z6G3 386 aa19.58■□□□□ 0.72
DDR1-268ENST00000512694 NOL10Q9BSC4 688 aaKnown RBP19.58■□□□□ 0.72
DDR1-268ENST00000512694 GPR108Q9NPR9 543 aa19.58■□□□□ 0.72
DDR1-268ENST00000512694 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
DDR1-268ENST00000512694 RLBP1P12271 317 aa19.57■□□□□ 0.72
DDR1-268ENST00000512694 IRX3P78415 501 aaPredicted RBP19.57■□□□□ 0.72
DDR1-268ENST00000512694 PABPC4Q13310 644 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDR1-268ENST00000512694 AATFQ9NY61 560 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDR1-268ENST00000512694 SURF6O75683 361 aaKnown RBP19.56■□□□□ 0.72
DDR1-268ENST00000512694 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
DDR1-268ENST00000512694 CHMP4BQ9H444 224 aaKnown RBP19.56■□□□□ 0.72
DDR1-268ENST00000512694 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
DDR1-268ENST00000512694 AS3MTQ9HBK9 375 aa19.56■□□□□ 0.72
DDR1-268ENST00000512694 GDF11O95390 407 aa19.55■□□□□ 0.72
DDR1-268ENST00000512694 SYN1P17600 705 aa19.55■□□□□ 0.72
DDR1-268ENST00000512694 CYP2B6P20813 491 aa19.55■□□□□ 0.72
DDR1-268ENST00000512694 JAG1P78504 1218 aa19.55■□□□□ 0.72
DDR1-268ENST00000512694 NAA16Q6N069 864 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms