RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SMYD4Q8IYR2 804 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-207ENST00000512462 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-207ENST00000512462 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 USP21Q9UK80 565 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
PRDM16-207ENST00000512462 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
PRDM16-207ENST00000512462 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-207ENST00000512462 RAD51AP2Q09MP3 1159 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 CELF1Q92879 486 aaKnown RBP13.62□□□□□ -0.23
PRDM16-207ENST00000512462 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 NMT2O60551 498 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 TNNI2P48788 182 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 FAM193AP78312 1265 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 STIM1Q13586 685 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 VPS16Q9H269 839 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 ZBTB22O15209 634 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 POLR3GO15318 223 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-207ENST00000512462 CYP19A1P11511 503 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-207ENST00000512462 KIF5BP33176 963 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-207ENST00000512462 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
PRDM16-207ENST00000512462 NEDD4P46934 1319 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 PRDX5P30044 214 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 KRT2P35908 639 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 ZNF76P36508 570 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 STAT6P42226 847 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
PRDM16-207ENST00000512462 DYNLL2Q96FJ2 89 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 CYP2D6P10635 497 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 SCNN1DP51172 638 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
PRDM16-207ENST00000512462 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 KIAA1468Q9P260 1216 aa13.61□□□□□ -0.23
PRDM16-207ENST00000512462 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 CDC27P30260 824 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 FANCCQ00597 558 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
PRDM16-207ENST00000512462 SLIT3O75094 1523 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 MTIF2P46199 727 aaKnown RBP13.6□□□□□ -0.23
PRDM16-207ENST00000512462 ADKP55263 362 aaKnown RBP13.6□□□□□ -0.23
PRDM16-207ENST00000512462 DOK7Q18PE1 504 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 RABL6Q3YEC7 729 aaPredicted RBP13.6□□□□□ -0.23
PRDM16-207ENST00000512462 CACTINQ8WUQ7 758 aaKnown RBP13.6□□□□□ -0.23
PRDM16-207ENST00000512462 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 ARGLU1Q9NWB6 273 aaPredicted RBP13.6□□□□□ -0.23
PRDM16-207ENST00000512462 CIAO1O76071 339 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 GNAT2P19087 354 aa13.6□□□□□ -0.23
PRDM16-207ENST00000512462 DEXIO95424 95 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 GTF2IP78347 998 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 ADALQ6DHV7 355 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 KIAA1328Q86T90 577 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 CERS3Q8IU89 383 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 MMRN2Q9H8L6 949 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 ELP1O95163 1332 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 LDHCP07864 332 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 TNNT3P45378 269 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 ST5P78524 1137 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 MYL5Q02045 173 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 TCP11L1Q9NUJ3 509 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 ASIC1P78348 528 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
PRDM16-207ENST00000512462 ZNHIT6Q9NWK9 470 aaKnown RBP13.59□□□□□ -0.23
PRDM16-207ENST00000512462 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 MATR3P43243 847 aaKnown RBP eCLIP13.58□□□□□ -0.242e-9■■■■■ 33.8
PRDM16-207ENST00000512462 KIF23Q02241 960 aaPredicted RBP13.58□□□□□ -0.24
PRDM16-207ENST00000512462 ARID5AQ03989 594 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 SLC44A5Q8NCS7 719 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRDM16-207ENST00000512462 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 RBM26Q5T8P6 1007 aaKnown RBP13.58□□□□□ -0.24
PRDM16-207ENST00000512462 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 LINC00301Q8NCQ3 95 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
PRDM16-207ENST00000512462 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
PRDM16-207ENST00000512462 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 GSDMDP57764 484 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms