RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
CCHCR1-229ENST00000512418 MYPNQ86TC9 1320 aa18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 MYCP01106 439 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 PLCG2P16885 1265 aa18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 SH3RF3Q8TEJ3 882 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 AGTPBP1Q9UPW5 1226 aa18.03■□□□□ 0.48
CCHCR1-229ENST00000512418 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 CYP2E1P05181 493 aaPredicted RBP18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 CCDC84Q86UT8 332 aaPredicted RBP18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 SMCR8Q8TEV9 937 aaPredicted RBP18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 GCC1Q96CN9 775 aa18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 AATFQ9NY61 560 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 DBNLQ9UJU6 430 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-229ENST00000512418 ATAD5Q96QE3 1844 aa18.02■□□□□ 0.47
CCHCR1-229ENST00000512418 MGAMO43451 1857 aa18.01■□□□□ 0.47
CCHCR1-229ENST00000512418 GRK4P32298 578 aa18.01■□□□□ 0.47
CCHCR1-229ENST00000512418 PPP4CP60510 307 aa18.01■□□□□ 0.47
CCHCR1-229ENST00000512418 PI4KBQ9UBF8 816 aa18.01■□□□□ 0.47
CCHCR1-229ENST00000512418 PNMA3Q9UL41 463 aa18.01■□□□□ 0.47
CCHCR1-229ENST00000512418 LOC285556D6RIA3 1793 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 CAP2P40123 477 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 ZAP70P43403 619 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 PRKCZQ05513 592 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 CEP85Q6P2H3 762 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 PROCA1Q8NCQ7 364 aaPredicted RBP18■□□□□ 0.47
CCHCR1-229ENST00000512418 ZNF280CQ8ND82 737 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 FOCADQ5VW36 1801 aa18■□□□□ 0.47
CCHCR1-229ENST00000512418 FLT1P17948 1338 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 SPP2Q13103 211 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 MTFR1Q15390 333 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 ADGRA1Q86SQ6 560 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 TGFBRAP1Q8WUH2 860 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 EAF2Q96CJ1 260 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 TLR7Q9NYK1 1049 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 SIPA1L1O43166 1804 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 CDK5RAP2Q96SN8 1893 aa17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 MYO5AQ9Y4I1 1855 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-229ENST00000512418 USP17L5A8MUK1 530 aa17.98■□□□□ 0.47
CCHCR1-229ENST00000512418 TREML2Q5T2D2 321 aa17.98■□□□□ 0.47
CCHCR1-229ENST00000512418 SLAIN1Q8ND83 568 aa17.98■□□□□ 0.47
CCHCR1-229ENST00000512418 CCDC8Q9H0W5 538 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-229ENST00000512418 AS3MTQ9HBK9 375 aa17.98■□□□□ 0.47
CCHCR1-229ENST00000512418 PIH1D3Q9NQM4 214 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-229ENST00000512418 TNPO2O14787 897 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 UBXN2AP68543 259 aa17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 RRP1BQ14684 758 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 MAPKAPK5Q8IW41 473 aa17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 ANKRD13CQ8N6S4 541 aa17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 GABRQQ9UN88 632 aa17.97■□□□□ 0.47
CCHCR1-229ENST00000512418 ASNSP08243 561 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 HMGCS2P54868 508 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 FAM110CQ1W6H9 321 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 SH3D19Q5HYK7 790 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 CERS3Q8IU89 383 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 FOXP4Q8IVH2 680 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 TRIM34Q9BYJ4 488 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 DNAJC18Q9H819 358 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 EXOC6BQ9Y2D4 811 aa17.96■□□□□ 0.47
CCHCR1-229ENST00000512418 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 GJB1P08034 283 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 CCL5P13501 91 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 CYP7A1P22680 504 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 GCLCP48506 637 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 FLT3LGP49771 235 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 CRACR2BQ8N4Y2 399 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 WDR18Q9BV38 432 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 RNF208Q9H0X6 261 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 GINM1Q9NU53 330 aa17.95■□□□□ 0.46
CCHCR1-229ENST00000512418 ADCY3O60266 1144 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 HLA-DOAP06340 250 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 MS4A1P11836 297 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 GJA8P48165 433 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 IRF5Q13568 498 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 TMED8Q6PL24 325 aaPredicted RBP17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 PXYLP1Q8TE99 480 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 COA7Q96BR5 231 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 PALD1Q9ULE6 856 aa17.94■□□□□ 0.46
CCHCR1-229ENST00000512418 BACE1P56817 501 aa17.93■□□□□ 0.46
CCHCR1-229ENST00000512418 DYNLL1P63167 89 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-229ENST00000512418 MTMR2Q13614 643 aa17.93■□□□□ 0.46
CCHCR1-229ENST00000512418 AACSQ86V21 672 aa17.93■□□□□ 0.46
CCHCR1-229ENST00000512418 ASCC2Q9H1I8 757 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-229ENST00000512418 PCDH10Q9P2E7 1040 aa17.93■□□□□ 0.46
CCHCR1-229ENST00000512418 MAP3K12Q12852 859 aa17.92■□□□□ 0.46
CCHCR1-229ENST00000512418 HABP4Q5JVS0 413 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-229ENST00000512418 MAGEB6Q8N7X4 407 aa17.92■□□□□ 0.46
CCHCR1-229ENST00000512418 MIGA1Q8NAN2 632 aa17.92■□□□□ 0.46
CCHCR1-229ENST00000512418 TMOD4Q9NZQ9 345 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms