RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
PDGFRA-209ENST00000512143 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 B4E1Z4 1266 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 POLR3DP05423 398 aaPredicted RBP11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 CACNB3P54284 484 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 PICALMQ13492 652 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 Q6ZUG5 572 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 RALYLQ86SE5 291 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 METTL16Q86W50 562 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 IGDCC4Q8TDY8 1250 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 MTA3Q9BTC8 594 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 DHX36Q9H2U1 1008 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
PDGFRA-209ENST00000512143 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 PRC1O43663 620 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 KDM4AO75164 1064 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 DDNO94850 711 aaPredicted RBP11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 CUL4AQ13619 759 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 ANKRD1Q15327 319 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 CHST3Q7LGC8 479 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 TTC6Q86TZ1 520 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 AMOTL1Q8IY63 956 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 EHD4Q9H223 541 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 LIMCH1Q9UPQ0 1083 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 SIPA1L1O43166 1804 aa11.79□□□□□ -0.52
PDGFRA-209ENST00000512143 CLRN2A0PK11 232 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 H7C1D1 291 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 RASA1P20936 1047 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 EPS15P42566 896 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 CDK8P49336 464 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 PDE4BQ07343 736 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 ESR2Q92731 530 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
PDGFRA-209ENST00000512143 MYO1BO43795 1136 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 PRDM1O75626 825 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 LARGE1O95461 756 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 LIFRP42702 1097 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 ST3GAL1Q11201 340 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 TCP10Q12799 353 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 SEC23AQ15436 765 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 ME3Q16798 604 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 SGMS1Q86VZ5 419 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 FOXP4Q8IVH2 680 aaPredicted RBP11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 STK11IPQ8N1F8 1099 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 BRF1Q92994 677 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
PDGFRA-209ENST00000512143 TCP10L2B9ZVM9 353 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 HLA-DOAP06340 250 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 SHMT1P34896 483 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 NOVP48745 357 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 TBC1D10BQ4KMP7 808 aaPredicted RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 ANKS1AQ92625 1134 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 DNAJC18Q9H819 358 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 ANGEL1Q9UNK9 670 aaKnown RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 ASTN2O75129 1339 aaPredicted RBP11.76□□□□□ -0.53
PDGFRA-209ENST00000512143 GLTPD2A6NH11 291 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 DDIT3P35638 169 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 TFAP4Q01664 338 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms