RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 IVNS1ABPQ9Y6Y0 642 aa12.29□□□□□ -0.44
USP53-206ENST00000510737 C8AP07357 584 aa12.28□□□□□ -0.44
USP53-206ENST00000510737 HRASLS5Q96KN8 279 aa12.28□□□□□ -0.44
USP53-206ENST00000510737 ASB16Q96NS5 453 aa12.28□□□□□ -0.44
USP53-206ENST00000510737 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
USP53-206ENST00000510737 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
USP53-206ENST00000510737 PPM1HQ9ULR3 514 aa12.28□□□□□ -0.44
USP53-206ENST00000510737 PTPN11Q06124 597 aaPredicted RBP12.27□□□□□ -0.45
USP53-206ENST00000510737 ZBTB37Q5TC79 503 aa12.27□□□□□ -0.45
USP53-206ENST00000510737 LRRN4CLQ8ND94 238 aa12.27□□□□□ -0.45
USP53-206ENST00000510737 CEP44Q9C0F1 390 aa12.27□□□□□ -0.45
USP53-206ENST00000510737 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
USP53-206ENST00000510737 RBAK-RBAKDNI3L0D1 243 aa12.26□□□□□ -0.45
USP53-206ENST00000510737 LLGL2Q6P1M3 1020 aa12.26□□□□□ -0.45
USP53-206ENST00000510737 ANKRD24Q8TF21 1146 aa12.26□□□□□ -0.45
USP53-206ENST00000510737 TMEM265A0A087WTH1 108 aa12.25□□□□□ -0.45
USP53-206ENST00000510737 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
USP53-206ENST00000510737 ATG4DQ86TL0 474 aaPredicted RBP12.25□□□□□ -0.45
USP53-206ENST00000510737 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
USP53-206ENST00000510737 PCDHA4Q9UN74 947 aa12.25□□□□□ -0.45
USP53-206ENST00000510737 EOMESO95936 686 aa12.24□□□□□ -0.45
USP53-206ENST00000510737 FZD5Q13467 585 aa12.24□□□□□ -0.45
USP53-206ENST00000510737 INPP5AQ14642 412 aa12.24□□□□□ -0.45
USP53-206ENST00000510737 ALG1LQ6GMV1 187 aa12.24□□□□□ -0.45
USP53-206ENST00000510737 PRDM7Q9NQW5 492 aa12.24□□□□□ -0.45
USP53-206ENST00000510737 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 FANCGO15287 622 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 P4HBP07237 508 aaKnown RBP12.23□□□□□ -0.45
USP53-206ENST00000510737 JAG1P78504 1218 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 NKPD1Q17RQ9 610 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 PCNX4Q63HM2 1172 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 ZSCAN29Q8IWY8 852 aaPredicted RBP12.23□□□□□ -0.45
USP53-206ENST00000510737 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 C12orf49Q9H741 205 aa12.23□□□□□ -0.45
USP53-206ENST00000510737 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
USP53-206ENST00000510737 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
USP53-206ENST00000510737 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
USP53-206ENST00000510737 SAMM50Q9Y512 469 aa12.22□□□□□ -0.45
USP53-206ENST00000510737 IGF2BP3O00425 579 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP53-206ENST00000510737 GIPC1O14908 333 aa12.21□□□□□ -0.45
USP53-206ENST00000510737 USP17L7P0C7H9 530 aa12.21□□□□□ -0.45
USP53-206ENST00000510737 FBRSQ9HAH7 460 aa12.21□□□□□ -0.45
USP53-206ENST00000510737 BAZ1AQ9NRL2 1556 aaPredicted RBP12.21□□□□□ -0.46
USP53-206ENST00000510737 CDK8P49336 464 aa12.2□□□□□ -0.46
USP53-206ENST00000510737 ZNF648Q5T619 568 aaPredicted RBP12.2□□□□□ -0.46
USP53-206ENST00000510737 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
USP53-206ENST00000510737 ARMCX6Q7L4S7 300 aa12.2□□□□□ -0.46
USP53-206ENST00000510737 GAL3ST3Q96A11 431 aa12.2□□□□□ -0.46
USP53-206ENST00000510737 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
USP53-206ENST00000510737 SNX11Q9Y5W9 270 aa12.2□□□□□ -0.46
USP53-206ENST00000510737 BIN1O00499 593 aa12.19□□□□□ -0.46
USP53-206ENST00000510737 LRRC14Q15048 493 aa12.19□□□□□ -0.46
USP53-206ENST00000510737 ANGEL2Q5VTE6 544 aaKnown RBP12.19□□□□□ -0.46
USP53-206ENST00000510737 GTF2IRD1Q9UHL9 959 aa12.19□□□□□ -0.46
USP53-206ENST00000510737 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
USP53-206ENST00000510737 SLITRK5O94991 958 aa12.18□□□□□ -0.46
USP53-206ENST00000510737 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
USP53-206ENST00000510737 FAM168AQ92567 244 aa12.18□□□□□ -0.46
USP53-206ENST00000510737 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
USP53-206ENST00000510737 SPG7Q9UQ90 795 aa12.18□□□□□ -0.46
USP53-206ENST00000510737 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 SCARA3Q6AZY7 606 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 SLC23A3Q6PIS1 610 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 ELMO3Q96BJ8 720 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 RNF19AQ9NV58 838 aa12.17□□□□□ -0.46
USP53-206ENST00000510737 PRR33A8MZF0 331 aa12.16□□□□□ -0.46
USP53-206ENST00000510737 SLBPQ14493 270 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP53-206ENST00000510737 NKG7Q16617 165 aa12.16□□□□□ -0.46
USP53-206ENST00000510737 ARID1BQ8NFD5 2236 aaPredicted RBP12.16□□□□□ -0.46
USP53-206ENST00000510737 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
USP53-206ENST00000510737 PRAMEF27A3QJZ7 478 aa12.15□□□□□ -0.46
USP53-206ENST00000510737 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
USP53-206ENST00000510737 KCNA1Q09470 495 aa12.15□□□□□ -0.46
USP53-206ENST00000510737 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
USP53-206ENST00000510737 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
USP53-206ENST00000510737 LRIG2O94898 1065 aa12.14□□□□□ -0.47
USP53-206ENST00000510737 LDHBP07195 334 aaKnown RBP12.14□□□□□ -0.47
USP53-206ENST00000510737 ZNF507Q8TCN5 953 aa12.14□□□□□ -0.47
USP53-206ENST00000510737 IKZF1Q13422 519 aa12.13□□□□□ -0.47
USP53-206ENST00000510737 ASB11Q8WXH4 323 aa12.13□□□□□ -0.47
USP53-206ENST00000510737 PRDM5Q9NQX1 630 aaPredicted RBP12.13□□□□□ -0.47
USP53-206ENST00000510737 ZP2Q05996 745 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 ZNF124Q15973 351 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 SV2BQ7L1I2 683 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 KCT2Q8NC54 265 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 RIN3Q8TB24 985 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
USP53-206ENST00000510737 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
USP53-206ENST00000510737 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
USP53-206ENST00000510737 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
USP53-206ENST00000510737 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
USP53-206ENST00000510737 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
USP53-206ENST00000510737 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
USP53-206ENST00000510737 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP53-206ENST00000510737 MAPK8IP1Q9UQF2 711 aa12.11□□□□□ -0.47
USP53-206ENST00000510737 FOXQ1Q9C009 403 aa12.1□□□□□ -0.47
USP53-206ENST00000510737 SEMA3GQ9NS98 782 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms