RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
RAB40C-202ENST00000509637 INHAP05111 366 aa19.67■□□□□ 0.74
RAB40C-202ENST00000509637 DNAJC18Q9H819 358 aa19.67■□□□□ 0.74
RAB40C-202ENST00000509637 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
RAB40C-202ENST00000509637 SGPL1O95470 568 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 CAP2P40123 477 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 TRIM32Q13049 653 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 POLA2Q14181 598 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 POTEEQ6S8J3 1075 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 ATF7IPQ6VMQ6 1270 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 SLF2Q8IX21 1173 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 TMEM57Q8N5G2 664 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 SLAIN1Q8ND83 568 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 DPF3Q92784 378 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 RAI14Q9P0K7 980 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 GJD2Q9UKL4 321 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 ATAD5Q96QE3 1844 aa19.66■□□□□ 0.74
RAB40C-202ENST00000509637 LOC285556D6RIA3 1793 aa19.65■□□□□ 0.74
RAB40C-202ENST00000509637 PLXNB2O15031 1838 aa19.65■□□□□ 0.74
RAB40C-202ENST00000509637 GNAI2P04899 355 aa19.65■□□□□ 0.74
RAB40C-202ENST00000509637 HMGCS2P54868 508 aa19.65■□□□□ 0.74
RAB40C-202ENST00000509637 IRF5Q13568 498 aa19.65■□□□□ 0.74
RAB40C-202ENST00000509637 CDK5RAP2Q96SN8 1893 aa19.65■□□□□ 0.74
RAB40C-202ENST00000509637 ALPK3Q96L96 1907 aa19.64■□□□□ 0.74
RAB40C-202ENST00000509637 TNPO2O14787 897 aaKnown RBP19.64■□□□□ 0.73
RAB40C-202ENST00000509637 CYP2E1P05181 493 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-202ENST00000509637 PXYLP1Q8TE99 480 aa19.64■□□□□ 0.73
RAB40C-202ENST00000509637 FRAT1Q92837 279 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-202ENST00000509637 PAK6Q9NQU5 681 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-202ENST00000509637 COL2A1P02458 1487 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-202ENST00000509637 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 FARP2O94887 1054 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 LDHCP07864 332 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 UBXN2AP68543 259 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 G3BP1Q13283 466 aaKnown RBP eCLIP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 SH3D19Q5HYK7 790 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 TEX11Q8IYF3 940 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 ZNF280CQ8ND82 737 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 NKX2-3Q8TAU0 364 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 SMCR8Q8TEV9 937 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 DIS3LQ8TF46 1054 aaKnown RBP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 DEFB118Q96PH6 123 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 CRISPLD2Q9H0B8 497 aa19.63■□□□□ 0.73
RAB40C-202ENST00000509637 ASCC2Q9H1I8 757 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 PIH1D3Q9NQM4 214 aaKnown RBP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 AATFQ9NY61 560 aaKnown RBP eCLIP19.63■□□□□ 0.73
RAB40C-202ENST00000509637 SZT2Q5T011 3432 aa19.62■□□□□ 0.73
RAB40C-202ENST00000509637 ZBTB7BO15156 539 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-202ENST00000509637 MNX1P50219 401 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-202ENST00000509637 FAM110CQ1W6H9 321 aa19.62■□□□□ 0.73
RAB40C-202ENST00000509637 TNNI3KQ59H18 835 aa19.62■□□□□ 0.73
RAB40C-202ENST00000509637 PROCA1Q8NCQ7 364 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-202ENST00000509637 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
RAB40C-202ENST00000509637 TLR7Q9NYK1 1049 aaKnown RBP19.62■□□□□ 0.73
RAB40C-202ENST00000509637 FPGT-TNNI3KV9GXZ4 949 aa19.62■□□□□ 0.73
RAB40C-202ENST00000509637 RANBP2P49792 3224 aaKnown RBP19.61■□□□□ 0.73
RAB40C-202ENST00000509637 RLBP1P12271 317 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 ZAP70P43403 619 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 PPP4CP60510 307 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 DYNLL1P63167 89 aaKnown RBP19.61■□□□□ 0.73
RAB40C-202ENST00000509637 ATP8B2P98198 1209 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 GORABQ5T7V8 394 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 METTL16Q86W50 562 aaKnown RBP19.61■□□□□ 0.73
RAB40C-202ENST00000509637 MAPKAPK5Q8IW41 473 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 SSH3Q8TE77 659 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 TGFBRAP1Q8WUH2 860 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 TXNRD2Q9NNW7 524 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 LRP2BPQ9P2M1 347 aa19.61■□□□□ 0.73
RAB40C-202ENST00000509637 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
RAB40C-202ENST00000509637 GSTO1P78417 241 aa19.6■□□□□ 0.73
RAB40C-202ENST00000509637 P2RX7Q99572 595 aaKnown RBP19.6■□□□□ 0.73
RAB40C-202ENST00000509637 TAOK2Q9UL54 1235 aa19.6■□□□□ 0.73
RAB40C-202ENST00000509637 PALD1Q9ULE6 856 aa19.6■□□□□ 0.73
RAB40C-202ENST00000509637 MAP4K4O95819 1239 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-202ENST00000509637 UQCRFS1P1P0C7P4 283 aa19.59■□□□□ 0.73
RAB40C-202ENST00000509637 Q3C1V9 767 aa19.59■□□□□ 0.73
RAB40C-202ENST00000509637 PAWRQ96IZ0 340 aaKnown RBP19.59■□□□□ 0.73
RAB40C-202ENST00000509637 WDR18Q9BV38 432 aa19.59■□□□□ 0.73
RAB40C-202ENST00000509637 GPR108Q9NPR9 543 aa19.59■□□□□ 0.73
RAB40C-202ENST00000509637 DBNLQ9UJU6 430 aaKnown RBP19.59■□□□□ 0.73
RAB40C-202ENST00000509637 NDUFB9Q9Y6M9 179 aa19.59■□□□□ 0.73
RAB40C-202ENST00000509637 FLT1P17948 1338 aa19.58■□□□□ 0.73
RAB40C-202ENST00000509637 SOX1O00570 391 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-202ENST00000509637 IPO8O15397 1037 aaKnown RBP19.58■□□□□ 0.72
RAB40C-202ENST00000509637 TFRCP02786 760 aaKnown RBP19.58■□□□□ 0.72
RAB40C-202ENST00000509637 MTMR2Q13614 643 aa19.58■□□□□ 0.72
RAB40C-202ENST00000509637 NAA16Q6N069 864 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-202ENST00000509637 EAF2Q96CJ1 260 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-202ENST00000509637 PI4KBQ9UBF8 816 aa19.58■□□□□ 0.72
RAB40C-202ENST00000509637 MORF4L1Q9UBU8 362 aa19.58■□□□□ 0.72
RAB40C-202ENST00000509637 FOCADQ5VW36 1801 aa19.58■□□□□ 0.72
RAB40C-202ENST00000509637 GDF11O95390 407 aa19.57■□□□□ 0.72
RAB40C-202ENST00000509637 COA7Q96BR5 231 aa19.57■□□□□ 0.72
RAB40C-202ENST00000509637 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.57■□□□□ 0.722e-10■■■■□ 22.8
RAB40C-202ENST00000509637 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-202ENST00000509637 RBPJLQ9UBG7 517 aa19.57■□□□□ 0.72
RAB40C-202ENST00000509637 SAP30BPQ9UHR5 308 aaKnown RBP19.57■□□□□ 0.72
RAB40C-202ENST00000509637 HERC5Q9UII4 1024 aaKnown RBP19.57■□□□□ 0.72
RAB40C-202ENST00000509637 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms