RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 DAGLAQ9Y4D2 1042 aa17.22■□□□□ 0.35
HMGCR-208ENST00000509431 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
HMGCR-208ENST00000509431 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
HMGCR-208ENST00000509431 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.21■□□□□ 0.35
HMGCR-208ENST00000509431 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.21■□□□□ 0.35
HMGCR-208ENST00000509431 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
HMGCR-208ENST00000509431 PPM1EQ8WY54 764 aa17.21■□□□□ 0.35
HMGCR-208ENST00000509431 USP6NLQ92738 828 aa17.21■□□□□ 0.35
HMGCR-208ENST00000509431 APBA2Q99767 749 aa17.21■□□□□ 0.35
HMGCR-208ENST00000509431 ENTPD3O75355 529 aa17.2■□□□□ 0.34
HMGCR-208ENST00000509431 ALYREFQ86V81 257 aaKnown RBP17.2■□□□□ 0.34
HMGCR-208ENST00000509431 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
HMGCR-208ENST00000509431 USP40Q9NVE5 1235 aa17.2■□□□□ 0.34
HMGCR-208ENST00000509431 DDX20Q9UHI6 824 aaKnown RBP17.2■□□□□ 0.34
HMGCR-208ENST00000509431 MYH13Q9UKX3 1938 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 TCF20Q9UGU0 1960 aaKnown RBP17.19■□□□□ 0.34
HMGCR-208ENST00000509431 TMEM31Q5JXX7 168 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 POTEEQ6S8J3 1075 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 SLC39A5Q6ZMH5 540 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 GPRC5AQ8NFJ5 357 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
HMGCR-208ENST00000509431 PDLIM7Q9NR12 457 aa17.19■□□□□ 0.34
HMGCR-208ENST00000509431 SNX17Q15036 470 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 CCL14Q16627 93 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 MFSD14CQ5VZR4 134 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 G2E3Q7L622 706 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 ZSCAN29Q8IWY8 852 aaPredicted RBP17.18■□□□□ 0.34
HMGCR-208ENST00000509431 ZFPM1Q8IX07 1006 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
HMGCR-208ENST00000509431 ZNF280CQ8ND82 737 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 IDI2Q9BXS1 227 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 CACNA1FO60840 1977 aa17.18■□□□□ 0.34
HMGCR-208ENST00000509431 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
HMGCR-208ENST00000509431 HMGCS2P54868 508 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 IRX3P78415 501 aaPredicted RBP17.17■□□□□ 0.34
HMGCR-208ENST00000509431 FLIIQ13045 1269 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 SPP2Q13103 211 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 MORN1Q5T089 497 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 TSPYL6Q8N831 410 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 ARRDC4Q8NCT1 418 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 UTYO14607 1347 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
HMGCR-208ENST00000509431 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
HMGCR-208ENST00000509431 RGS3P49796 1198 aa17.16■□□□□ 0.34
HMGCR-208ENST00000509431 FKBP5Q13451 457 aaPredicted RBP17.16■□□□□ 0.34
HMGCR-208ENST00000509431 AAK1Q2M2I8 961 aa17.16■□□□□ 0.34
HMGCR-208ENST00000509431 SH3D19Q5HYK7 790 aa17.16■□□□□ 0.34
HMGCR-208ENST00000509431 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
HMGCR-208ENST00000509431 CXXC1Q9P0U4 656 aaPredicted RBP17.16■□□□□ 0.34
HMGCR-208ENST00000509431 TRIM43BA6NCK2 446 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 KBTBD13C9JR72 458 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 BMP1P13497 986 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 DIXDC1Q155Q3 683 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 C1orf53Q5VUE5 145 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 GPR142Q7Z601 462 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 PLEKHH3Q7Z736 793 aa17.15■□□□□ 0.34
HMGCR-208ENST00000509431 CCDC84Q86UT8 332 aaPredicted RBP17.15■□□□□ 0.34
HMGCR-208ENST00000509431 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
HMGCR-208ENST00000509431 TRIM43Q96BQ3 446 aaPredicted RBP17.15■□□□□ 0.34
HMGCR-208ENST00000509431 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
HMGCR-208ENST00000509431 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
HMGCR-208ENST00000509431 TBC1D12O60347 775 aa17.14■□□□□ 0.33
HMGCR-208ENST00000509431 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
HMGCR-208ENST00000509431 MAP2K5Q13163 448 aa17.14■□□□□ 0.33
HMGCR-208ENST00000509431 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
HMGCR-208ENST00000509431 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
HMGCR-208ENST00000509431 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
HMGCR-208ENST00000509431 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
HMGCR-208ENST00000509431 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
HMGCR-208ENST00000509431 GPR37L1O60883 481 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
HMGCR-208ENST00000509431 CNGA1P29973 690 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 HERVK_113P62684 666 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
HMGCR-208ENST00000509431 PRDM12Q9H4Q4 367 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 EPHX3Q9H6B9 360 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 AS3MTQ9HBK9 375 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 TXNRD2Q9NNW7 524 aa17.13■□□□□ 0.33
HMGCR-208ENST00000509431 ATAD5Q96QE3 1844 aa17.12■□□□□ 0.33
HMGCR-208ENST00000509431 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
HMGCR-208ENST00000509431 PDE8BO95263 885 aa17.12■□□□□ 0.33
HMGCR-208ENST00000509431 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
HMGCR-208ENST00000509431 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
HMGCR-208ENST00000509431 ERVK-24P63145 666 aa17.12■□□□□ 0.33
HMGCR-208ENST00000509431 GJC2Q5T442 439 aaPredicted RBP17.12■□□□□ 0.33
HMGCR-208ENST00000509431 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
HMGCR-208ENST00000509431 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
HMGCR-208ENST00000509431 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
HMGCR-208ENST00000509431 GRM8O00222 908 aa17.11■□□□□ 0.33
HMGCR-208ENST00000509431 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
HMGCR-208ENST00000509431 EPHB4P54760 987 aa17.11■□□□□ 0.33
HMGCR-208ENST00000509431 FPGSQ05932 587 aa17.11■□□□□ 0.33
HMGCR-208ENST00000509431 RALBP1Q15311 655 aa17.11■□□□□ 0.33
HMGCR-208ENST00000509431 CCDC85BQ15834 202 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms