RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 GADL1Q6ZQY3 521 aa17.87■□□□□ 0.45
HMGCL-208ENST00000509389 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
HMGCL-208ENST00000509389 SSH3Q8TE77 659 aa17.87■□□□□ 0.45
HMGCL-208ENST00000509389 GPR108Q9NPR9 543 aa17.87■□□□□ 0.45
HMGCL-208ENST00000509389 LRP2BPQ9P2M1 347 aa17.87■□□□□ 0.45
HMGCL-208ENST00000509389 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.87■□□□□ 0.45
HMGCL-208ENST00000509389 TNNI3KQ59H18 835 aa17.86■□□□□ 0.45
HMGCL-208ENST00000509389 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
HMGCL-208ENST00000509389 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
HMGCL-208ENST00000509389 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.86■□□□□ 0.45
HMGCL-208ENST00000509389 SNRKQ9NRH2 765 aa17.86■□□□□ 0.45
HMGCL-208ENST00000509389 FPGT-TNNI3KV9GXZ4 949 aa17.86■□□□□ 0.45
HMGCL-208ENST00000509389 COL2A1P02458 1487 aaPredicted RBP17.85■□□□□ 0.45
HMGCL-208ENST00000509389 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
HMGCL-208ENST00000509389 FAM196BA6NMK8 535 aa17.85■□□□□ 0.45
HMGCL-208ENST00000509389 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
HMGCL-208ENST00000509389 RAET1EQ8TD07 263 aa17.85■□□□□ 0.45
HMGCL-208ENST00000509389 DBNDD2Q9BQY9 259 aa17.85■□□□□ 0.45
HMGCL-208ENST00000509389 OSBPL5Q9H0X9 879 aaPredicted RBP17.85■□□□□ 0.45
HMGCL-208ENST00000509389 SLC45A1Q9Y2W3 748 aa17.85■□□□□ 0.45
HMGCL-208ENST00000509389 MYPNQ86TC9 1320 aa17.85■□□□□ 0.45
HMGCL-208ENST00000509389 ATAD5Q96QE3 1844 aa17.84■□□□□ 0.45
HMGCL-208ENST00000509389 SURF6O75683 361 aaKnown RBP17.84■□□□□ 0.45
HMGCL-208ENST00000509389 TTC39AQ5SRH9 613 aa17.84■□□□□ 0.45
HMGCL-208ENST00000509389 TEX11Q8IYF3 940 aa17.84■□□□□ 0.45
HMGCL-208ENST00000509389 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
HMGCL-208ENST00000509389 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
HMGCL-208ENST00000509389 MAST2Q6P0Q8 1798 aa17.84■□□□□ 0.45
HMGCL-208ENST00000509389 IGHDP01880 384 aa17.83■□□□□ 0.45
HMGCL-208ENST00000509389 GRK4P32298 578 aa17.83■□□□□ 0.45
HMGCL-208ENST00000509389 FCGRTP55899 365 aa17.83■□□□□ 0.45
HMGCL-208ENST00000509389 MTFR1Q15390 333 aa17.83■□□□□ 0.45
HMGCL-208ENST00000509389 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.45
HMGCL-208ENST00000509389 GCC1Q96CN9 775 aa17.83■□□□□ 0.45
HMGCL-208ENST00000509389 PRKCZQ05513 592 aa17.82■□□□□ 0.44
HMGCL-208ENST00000509389 NAA16Q6N069 864 aaPredicted RBP17.82■□□□□ 0.44
HMGCL-208ENST00000509389 NOL10Q9BSC4 688 aaKnown RBP17.82■□□□□ 0.44
HMGCL-208ENST00000509389 AATFQ9NY61 560 aaKnown RBP eCLIP17.82■□□□□ 0.44
HMGCL-208ENST00000509389 AGTPBP1Q9UPW5 1226 aa17.82■□□□□ 0.44
HMGCL-208ENST00000509389 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
HMGCL-208ENST00000509389 CDK5RAP2Q96SN8 1893 aa17.82■□□□□ 0.44
HMGCL-208ENST00000509389 SIPA1L1O43166 1804 aa17.82■□□□□ 0.44
HMGCL-208ENST00000509389 CYP2E1P05181 493 aaPredicted RBP17.81■□□□□ 0.44
HMGCL-208ENST00000509389 CAP2P40123 477 aa17.81■□□□□ 0.44
HMGCL-208ENST00000509389 RRP1BQ14684 758 aaKnown RBP17.81■□□□□ 0.44
HMGCL-208ENST00000509389 SIRT2Q8IXJ6 389 aa17.81■□□□□ 0.44
HMGCL-208ENST00000509389 ZNF512BQ96KM6 892 aaPredicted RBP17.81■□□□□ 0.44
HMGCL-208ENST00000509389 GABRQQ9UN88 632 aa17.81■□□□□ 0.44
HMGCL-208ENST00000509389 BAG3O95817 575 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 PPP4CP60510 307 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 SPP2Q13103 211 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 TREML2Q5T2D2 321 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 ADGRA1Q86SQ6 560 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
HMGCL-208ENST00000509389 HERC5Q9UII4 1024 aaKnown RBP17.8■□□□□ 0.44
HMGCL-208ENST00000509389 LOC285556D6RIA3 1793 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 FOCADQ5VW36 1801 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 DOCK3Q8IZD9 2030 aa17.8■□□□□ 0.44
HMGCL-208ENST00000509389 ZAP70P43403 619 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 CEP85Q6P2H3 762 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 PROCA1Q8NCQ7 364 aaPredicted RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 ZNF280CQ8ND82 737 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 SHISA4Q96DD7 197 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 DHX36Q9H2U1 1008 aaKnown RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 PIH1D3Q9NQM4 214 aaKnown RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 TLR7Q9NYK1 1049 aaKnown RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 PI4KBQ9UBF8 816 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 CEP290O15078 2479 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 CCL5P13501 91 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 PLCG2P16885 1265 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 SLAIN1Q8ND83 568 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
HMGCL-208ENST00000509389 CCDC8Q9H0W5 538 aaPredicted RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 RWDD1Q9H446 243 aaPredicted RBP17.79■□□□□ 0.44
HMGCL-208ENST00000509389 USP17L5A8MUK1 530 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 TNPO2O14787 897 aaKnown RBP17.78■□□□□ 0.44
HMGCL-208ENST00000509389 IGSF3O75054 1194 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 FLT3LGP49771 235 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 HMGCS2P54868 508 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 UBXN2AP68543 259 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 HABP4Q5JVS0 413 aaKnown RBP17.78■□□□□ 0.44
HMGCL-208ENST00000509389 ANKRD13CQ8N6S4 541 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 NKX2-3Q8TAU0 364 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
HMGCL-208ENST00000509389 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 PNMA3Q9UL41 463 aa17.78■□□□□ 0.44
HMGCL-208ENST00000509389 FLT1P17948 1338 aa17.77■□□□□ 0.44
HMGCL-208ENST00000509389 ADCY3O60266 1144 aa17.77■□□□□ 0.43
HMGCL-208ENST00000509389 GJB1P08034 283 aa17.77■□□□□ 0.43
HMGCL-208ENST00000509389 GJA8P48165 433 aa17.77■□□□□ 0.43
HMGCL-208ENST00000509389 RNF208Q9H0X6 261 aa17.77■□□□□ 0.43
HMGCL-208ENST00000509389 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
HMGCL-208ENST00000509389 JAG1P78504 1218 aa17.76■□□□□ 0.43
HMGCL-208ENST00000509389 FAM110CQ1W6H9 321 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms