RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
SH3D21-206ENST00000508854 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
SH3D21-206ENST00000508854 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
SH3D21-206ENST00000508854 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
SH3D21-206ENST00000508854 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 SRGAP3O43295 1099 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 HMGCRP04035 888 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 CAP2P40123 477 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 RHBDL3P58872 404 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 SPP2Q13103 211 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 SPATA5Q8NB90 893 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.35□□□□□ -0.43
SH3D21-206ENST00000508854 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
SH3D21-206ENST00000508854 PTPRFP10586 1907 aa12.35□□□□□ -0.43
SH3D21-206ENST00000508854 IGSF3O75054 1194 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 BAG3O95817 575 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 PLCG2P16885 1265 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 TFCP2Q12800 502 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 MTX1Q13505 466 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 TRMT44Q8IYL2 757 aaKnown RBP12.34□□□□□ -0.43
SH3D21-206ENST00000508854 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
SH3D21-206ENST00000508854 PAWRQ96IZ0 340 aaKnown RBP12.34□□□□□ -0.43
SH3D21-206ENST00000508854 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
SH3D21-206ENST00000508854 GINM1Q9NU53 330 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 PI4KBQ9UBF8 816 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 RPTORQ8N122 1335 aa12.34□□□□□ -0.43
SH3D21-206ENST00000508854 IPO8O15397 1037 aaKnown RBP12.33□□□□□ -0.44
SH3D21-206ENST00000508854 BMP8BP34820 402 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 HMGCS2P54868 508 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 GPR153Q6NV75 609 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 NSUN4Q96CB9 384 aaKnown RBP12.33□□□□□ -0.44
SH3D21-206ENST00000508854 MEIS3Q99687 375 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 HMG20BQ9P0W2 317 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 LRP2BPQ9P2M1 347 aa12.33□□□□□ -0.44
SH3D21-206ENST00000508854 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 ASNSP08243 561 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 IRX3P78415 501 aaPredicted RBP12.32□□□□□ -0.44
SH3D21-206ENST00000508854 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
SH3D21-206ENST00000508854 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
SH3D21-206ENST00000508854 GTF3C2Q8WUA4 911 aaPredicted RBP12.32□□□□□ -0.44
SH3D21-206ENST00000508854 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
SH3D21-206ENST00000508854 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
SH3D21-206ENST00000508854 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
SH3D21-206ENST00000508854 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
SH3D21-206ENST00000508854 HOXA7P31268 230 aaPredicted RBP12.31□□□□□ -0.44
SH3D21-206ENST00000508854 BACE1P56817 501 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 ATF7IPQ6VMQ6 1270 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
SH3D21-206ENST00000508854 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
SH3D21-206ENST00000508854 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 GJD2Q9UKL4 321 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 DOCK3Q8IZD9 2030 aa12.31□□□□□ -0.44
SH3D21-206ENST00000508854 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 FAM196BA6NMK8 535 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 GNAI2P04899 355 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 MAPK4P31152 587 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 CCDC158Q5M9N0 1113 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 TBC1D9Q6ZT07 1266 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 GDF15Q99988 308 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 C11orf49Q9H6J7 331 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.3□□□□□ -0.44
SH3D21-206ENST00000508854 OGDHLQ9ULD0 1010 aa12.3□□□□□ -0.44
SH3D21-206ENST00000508854 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
SH3D21-206ENST00000508854 SLURP2P0DP57 97 aa12.29□□□□□ -0.44
SH3D21-206ENST00000508854 RARSP54136 660 aaKnown RBP12.29□□□□□ -0.44
SH3D21-206ENST00000508854 PPP4CP60510 307 aa12.29□□□□□ -0.44
SH3D21-206ENST00000508854 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
SH3D21-206ENST00000508854 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
SH3D21-206ENST00000508854 C7orf61Q8IZ16 206 aa12.29□□□□□ -0.44
SH3D21-206ENST00000508854 CRACR2BQ8N4Y2 399 aaPredicted RBP12.29□□□□□ -0.44
SH3D21-206ENST00000508854 ATAD5Q96QE3 1844 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 DLL1O00548 723 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
SH3D21-206ENST00000508854 HLA-DOAP06340 250 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 HERVK_113P62684 666 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 MTMR2Q13614 643 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
SH3D21-206ENST00000508854 SH3RF3Q8TEJ3 882 aaPredicted RBP12.28□□□□□ -0.44
SH3D21-206ENST00000508854 DIS3LQ8TF46 1054 aaKnown RBP12.28□□□□□ -0.44
SH3D21-206ENST00000508854 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms