RNA–Protein interactions for RNA: ENST00000508660.5

ATP2C1-215, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2C1, Length 943 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-215ENST00000508660 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 PODNQ7Z5L7 613 aa9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 PARP9Q8IXQ6 854 aa9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 POLR3GLQ9BT43 218 aa9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 PAK6Q9NQU5 681 aaPredicted RBP9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 GGA1Q9UJY5 639 aa9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 GABRQQ9UN88 632 aa9.09□□□□□ -0.95
ATP2C1-215ENST00000508660 COL1A1P02452 1464 aaPredicted RBP9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 SH3TC1Q8TE82 1336 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 C5orf42Q9H799 3197 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 ZDBF2Q9HCK1 2354 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 AVPP01185 164 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 ELNP15502 786 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 HOXD10P28358 340 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 PTCRAQ6ISU1 281 aaPredicted RBP9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 DOCK3Q8IZD9 2030 aa9.08□□□□□ -0.96
ATP2C1-215ENST00000508660 INHAP05111 366 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 MS4A1P11836 297 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 FOSL2P15408 326 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 PROSER3Q2NL68 480 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 SUPT20HL1Q3ZLR7 823 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 MRGPRX2Q96LB1 330 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 SEC31BQ9NQW1 1179 aa9.07□□□□□ -0.96
ATP2C1-215ENST00000508660 FAM205AQ6ZU69 1335 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 ADGRA2Q96PE1 1338 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 ADCY3O60266 1144 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 ANXA1P04083 346 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 CAPN2P17655 700 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 VGLL4Q14135 290 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 TAF7Q15545 349 aaPredicted RBP9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 CRIPAKQ8N1N5 446 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 ADAMTS19Q8TE59 1207 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 FAM89AQ96GI7 184 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 PPP2R3BQ9Y5P8 575 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 MGAMO43451 1857 aa9.06□□□□□ -0.96
ATP2C1-215ENST00000508660 ZNF804BA4D1E1 1349 aa9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 TCF20Q9UGU0 1960 aaKnown RBP9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 CLRN2A0PK11 232 aa9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 U2SURPO15042 1029 aaKnown RBP9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 SMPD1P17405 629 aa9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 EIF4A1P60842 406 aaKnown RBP9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 ZCCHC17Q9NP64 241 aaKnown RBP9.05□□□□□ -0.96
ATP2C1-215ENST00000508660 J3QL48 77 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 CETPP11597 493 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 PRKAR2BP31323 418 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 MMP14P50281 582 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 RASA3Q14644 834 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 NECAB3Q96P71 396 aaPredicted RBP9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 UHRF1Q96T88 793 aaPredicted RBP9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 C1QTNF1Q9BXJ1 281 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 DDX60LQ5H9U9 1706 aaKnown RBP9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 TRIOO75962 3097 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 WDR87Q6ZQQ6 2873 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 PFASO15067 1338 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 MYO3BQ8WXR4 1341 aa9.04□□□□□ -0.96
ATP2C1-215ENST00000508660 ECM29Q5VYK3 1845 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 WDHD1O75717 1129 aaPredicted RBP9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 FLT3LGP49771 235 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 DLGAP5Q15398 846 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 HSP90AB3PQ58FF7 597 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 RTL5Q5HYW3 569 aaPredicted RBP9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 TXNRD3Q86VQ6 643 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 MTMR14Q8NCE2 650 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 SNIP1Q8TAD8 396 aaKnown RBP9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 PRMT6Q96LA8 375 aaPredicted RBP9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 ASB2Q96Q27 587 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 RSPH6AQ9H0K4 717 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 C11orf49Q9H6J7 331 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 HCN4Q9Y3Q4 1203 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 TRANK1O15050 2925 aa9.03□□□□□ -0.96
ATP2C1-215ENST00000508660 TTC24A2A3L6 582 aaPredicted RBP9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 BCRP11274 1271 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 ATP2B4P23634 1241 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 TTLL5Q6EMB2 1281 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 CERS5Q8N5B7 392 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 RTF1Q92541 710 aaKnown RBP9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 TEPSINQ96N21 525 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 EPHX3Q9H6B9 360 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 VEZTQ9HBM0 779 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 SNCAIPQ9Y6H5 919 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 XDHP47989 1333 aa9.02□□□□□ -0.97
ATP2C1-215ENST00000508660 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
ATP2C1-215ENST00000508660 MRE11P49959 708 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms