RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 GIPC1O14908 333 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 RNASE1P07998 156 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 RING1Q06587 406 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 LRRC14Q15048 493 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 PI4K2BQ8TCG2 481 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 C12orf49Q9H741 205 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 PRDM10Q9NQV6 1147 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 MBNL3Q9NUK0 354 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
PDLIM5-211ENST00000508531 BIN1O00499 593 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 USP17L7P0C7H9 530 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 KCNA1Q09470 495 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 ZBTB37Q5TC79 503 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 PCNX4Q63HM2 1172 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 FAM214BQ7L5A3 538 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 ELMO3Q96BJ8 720 aa7.22□□□□□ -1.25
PDLIM5-211ENST00000508531 FANCGO15287 622 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 P4HBP07237 508 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 LRRN4CLQ8ND94 238 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 ANKRD24Q8TF21 1146 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 TNKS2Q9H2K2 1166 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 FAM8A1Q9UBU6 413 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 GTF2IRD1Q9UHL9 959 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 CYP8B1Q9UNU6 501 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 ERCC6Q03468 1493 aa7.21□□□□□ -1.26
PDLIM5-211ENST00000508531 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
PDLIM5-211ENST00000508531 PRAMEF27A3QJZ7 478 aa7.2□□□□□ -1.26
PDLIM5-211ENST00000508531 INPP5AQ14642 412 aa7.2□□□□□ -1.26
PDLIM5-211ENST00000508531 ANGEL2Q5VTE6 544 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-211ENST00000508531 POU5F2Q8N7G0 328 aa7.2□□□□□ -1.26
PDLIM5-211ENST00000508531 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-211ENST00000508531 LDHBP07195 334 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 C8AP07357 584 aa7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 LRFN4Q6PJG9 635 aa7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 ATG4DQ86TL0 474 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 PRDM7Q9NQW5 492 aa7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 SNX11Q9Y5W9 270 aa7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-211ENST00000508531 IGF2BP3O00425 579 aaKnown RBP eCLIP7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 EOMESO95936 686 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 SCARA3Q6AZY7 606 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 ARMCX6Q7L4S7 300 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 SPACA3Q8IXA5 215 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 KCT2Q8NC54 265 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 FAM168AQ92567 244 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 PLPPR2Q96GM1 343 aa7.18□□□□□ -1.26
PDLIM5-211ENST00000508531 IKZF1Q13422 519 aa7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 FZD5Q13467 585 aa7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 NKPD1Q17RQ9 610 aa7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 ZNF507Q8TCN5 953 aa7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 ASB11Q8WXH4 323 aa7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 FBRSQ9HAH7 460 aa7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-211ENST00000508531 GNAT3A8MTJ3 354 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 LRIG2O94898 1065 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 CDK8P49336 464 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 ZNF648Q5T619 568 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 TTBK2Q6IQ55 1244 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 SLC23A3Q6PIS1 610 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 SV2BQ7L1I2 683 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 CYFIP1Q7L576 1253 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 GAL3ST3Q96A11 431 aa7.16□□□□□ -1.26
PDLIM5-211ENST00000508531 SLITRK5O94991 958 aa7.15□□□□□ -1.26
PDLIM5-211ENST00000508531 EIF4BP23588 611 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-211ENST00000508531 ZP2Q05996 745 aa7.15□□□□□ -1.26
PDLIM5-211ENST00000508531 WIPI1Q5MNZ9 446 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-211ENST00000508531 HDXQ7Z353 690 aa7.15□□□□□ -1.26
PDLIM5-211ENST00000508531 FOXQ1Q9C009 403 aa7.15□□□□□ -1.26
PDLIM5-211ENST00000508531 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 GNA15P30679 374 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 ETF1P62495 437 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 JAG1P78504 1218 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 SLBPQ14493 270 aaKnown RBP eCLIP7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 NKG7Q16617 165 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 FRMD6Q96NE9 622 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 MIPEPQ99797 713 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 PITPNM2Q9BZ72 1349 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 WNT10AQ9GZT5 417 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 RNF19AQ9NV58 838 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 TPX2Q9ULW0 747 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 MAPK8IP1Q9UQF2 711 aa7.14□□□□□ -1.27
PDLIM5-211ENST00000508531 SCRIBQ14160 1630 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 SHROOM4Q9ULL8 1493 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 CNTNAP4Q9C0A0 1308 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 PRR33A8MZF0 331 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 CLCN7P51798 805 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 SEPT6Q14141 434 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 CCDC85BQ15834 202 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 PCDHB5Q9Y5E4 795 aa7.13□□□□□ -1.27
PDLIM5-211ENST00000508531 PRPF40AO75400 957 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-211ENST00000508531 FLAD1Q8NFF5 587 aa7.12□□□□□ -1.27
PDLIM5-211ENST00000508531 TMEM40Q8WWA1 233 aa7.12□□□□□ -1.27
PDLIM5-211ENST00000508531 HSPA12BQ96MM6 686 aa7.12□□□□□ -1.27
PDLIM5-211ENST00000508531 TRAIPQ9BWF2 469 aa7.12□□□□□ -1.27
PDLIM5-211ENST00000508531 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
PDLIM5-211ENST00000508531 FAM155AB1AL88 458 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 RBAK-RBAKDNI3L0D1 243 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms