RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 MFSD6Q6ZSS7 791 aa16.96■□□□□ 0.31
YIPF3-213ENST00000506469 CDAN1Q8IWY9 1227 aa16.96■□□□□ 0.31
YIPF3-213ENST00000506469 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.31
YIPF3-213ENST00000506469 EHD4Q9H223 541 aa16.96■□□□□ 0.31
YIPF3-213ENST00000506469 RNF41Q9H4P4 317 aaPredicted RBP16.96■□□□□ 0.31
YIPF3-213ENST00000506469 SERPINB13Q9UIV8 391 aa16.96■□□□□ 0.31
YIPF3-213ENST00000506469 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
YIPF3-213ENST00000506469 POTEIP0CG38 1075 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 POTEJP0CG39 1038 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 GABPAQ06546 454 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 PDE4BQ07343 736 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 SULF1Q8IWU6 871 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 TEPSINQ96N21 525 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 NEK1Q96PY6 1258 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.3
YIPF3-213ENST00000506469 PPP2R3BQ9Y5P8 575 aa16.96■□□□□ 0.3
YIPF3-213ENST00000506469 NEDD4P46934 1319 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 PRDM1O75626 825 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 FGRP09769 529 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 SLURP2P0DP57 97 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 PCP11498 1178 aaKnown RBP16.95■□□□□ 0.3
YIPF3-213ENST00000506469 PSMA5P28066 241 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 CDK8P49336 464 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 TRDNQ13061 729 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 FOXP4Q8IVH2 680 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-213ENST00000506469 CRACR2BQ8N4Y2 399 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-213ENST00000506469 NCOA7Q8NI08 942 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 TM6SF1Q9BZW5 370 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
YIPF3-213ENST00000506469 CASTP20810 708 aaKnown RBP16.94■□□□□ 0.3
YIPF3-213ENST00000506469 RRP12Q5JTH9 1297 aaKnown RBP16.94■□□□□ 0.3
YIPF3-213ENST00000506469 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
YIPF3-213ENST00000506469 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
YIPF3-213ENST00000506469 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 KRT23Q9C075 422 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 DNAJC18Q9H819 358 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 MKNK2Q9HBH9 465 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 ZNF287Q9HBT7 754 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 SWAP70Q9UH65 585 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
YIPF3-213ENST00000506469 LAMB1P07942 1786 aa16.94■□□□□ 0.3
YIPF3-213ENST00000506469 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 FAM196BA6NMK8 535 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 B4E1Z4 1266 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 ORC4O43929 436 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 CPA1P15085 419 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
YIPF3-213ENST00000506469 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
YIPF3-213ENST00000506469 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 NKX2-3Q8TAU0 364 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 UPF3BQ9BZI7 483 aaKnown RBP16.93■□□□□ 0.3
YIPF3-213ENST00000506469 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
YIPF3-213ENST00000506469 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
YIPF3-213ENST00000506469 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
YIPF3-213ENST00000506469 RASA1P20936 1047 aa16.92■□□□□ 0.3
YIPF3-213ENST00000506469 RABEP1Q15276 862 aa16.92■□□□□ 0.3
YIPF3-213ENST00000506469 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
YIPF3-213ENST00000506469 DLK2Q6UY11 383 aa16.92■□□□□ 0.3
YIPF3-213ENST00000506469 LDHDQ86WU2 507 aa16.92■□□□□ 0.3
YIPF3-213ENST00000506469 MB21D2Q8IYB1 491 aaPredicted RBP16.92■□□□□ 0.3
YIPF3-213ENST00000506469 GLIS2Q9BZE0 524 aaPredicted RBP16.92■□□□□ 0.3
YIPF3-213ENST00000506469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
YIPF3-213ENST00000506469 TBC1D12O60347 775 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
YIPF3-213ENST00000506469 KDM4AO75164 1064 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 SHMT1P34896 483 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-213ENST00000506469 RUFY3Q7L099 469 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-213ENST00000506469 ESR2Q92731 530 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-213ENST00000506469 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 MYH1P12882 1939 aa16.91■□□□□ 0.3
YIPF3-213ENST00000506469 MAP3K10Q02779 954 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 FAM47AQ5JRC9 791 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 DHX32Q7L7V1 743 aaKnown RBP16.9■□□□□ 0.3
YIPF3-213ENST00000506469 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 ZSWIM5Q9P217 1185 aa16.9■□□□□ 0.3
YIPF3-213ENST00000506469 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
YIPF3-213ENST00000506469 MCM5P33992 734 aa16.89■□□□□ 0.29
YIPF3-213ENST00000506469 NEK4P51957 841 aa16.89■□□□□ 0.29
YIPF3-213ENST00000506469 ANTXR2P58335 489 aa16.89■□□□□ 0.29
YIPF3-213ENST00000506469 TFAP4Q01664 338 aa16.89■□□□□ 0.29
YIPF3-213ENST00000506469 SUPT20HL1Q3ZLR7 823 aa16.89■□□□□ 0.29
YIPF3-213ENST00000506469 CDCA5Q96FF9 252 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms