RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 CTSBP07858 339 aa9.14□□□□□ -0.95
CHD1-204ENST00000505982 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
CHD1-204ENST00000505982 GRIA4P48058 902 aa9.14□□□□□ -0.95
CHD1-204ENST00000505982 ARID5AQ03989 594 aa9.14□□□□□ -0.95
CHD1-204ENST00000505982 STK11IPQ8N1F8 1099 aa9.14□□□□□ -0.95
CHD1-204ENST00000505982 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
CHD1-204ENST00000505982 BIN1O00499 593 aa9.13□□□□□ -0.95
CHD1-204ENST00000505982 SPRED3Q2MJR0 410 aa9.13□□□□□ -0.95
CHD1-204ENST00000505982 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
CHD1-204ENST00000505982 BCL7CQ8WUZ0 217 aaPredicted RBP9.13□□□□□ -0.95
CHD1-204ENST00000505982 TRIM56Q9BRZ2 755 aaKnown RBP9.13□□□□□ -0.95
CHD1-204ENST00000505982 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
CHD1-204ENST00000505982 CEP44Q9C0F1 390 aa9.13□□□□□ -0.95
CHD1-204ENST00000505982 GSX1Q9H4S2 264 aaPredicted RBP9.13□□□□□ -0.95
CHD1-204ENST00000505982 RLBP1P12271 317 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 GTF2F1P35269 517 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD1-204ENST00000505982 PAK2Q13177 524 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 PLCL1Q15111 1095 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 SV2BQ7L1I2 683 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 GPN3Q9UHW5 284 aaPredicted RBP9.12□□□□□ -0.95
CHD1-204ENST00000505982 DAGLAQ9Y4D2 1042 aa9.12□□□□□ -0.95
CHD1-204ENST00000505982 PAPLNO95428 1278 aa9.11□□□□□ -0.95
CHD1-204ENST00000505982 CYP27C1Q4G0S4 372 aa9.11□□□□□ -0.95
CHD1-204ENST00000505982 GPRASP2Q96D09 838 aa9.11□□□□□ -0.95
CHD1-204ENST00000505982 ITPKAP23677 461 aa9.1□□□□□ -0.95
CHD1-204ENST00000505982 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
CHD1-204ENST00000505982 DHX38Q92620 1227 aaKnown RBP9.1□□□□□ -0.95
CHD1-204ENST00000505982 MISP3Q96FF7 219 aa9.1□□□□□ -0.95
CHD1-204ENST00000505982 TMEM74Q96NL1 305 aa9.1□□□□□ -0.95
CHD1-204ENST00000505982 AOC2O75106 756 aa9.09□□□□□ -0.95
CHD1-204ENST00000505982 B3GALT4O96024 378 aa9.09□□□□□ -0.95
CHD1-204ENST00000505982 CELA3AP09093 270 aa9.09□□□□□ -0.95
CHD1-204ENST00000505982 ZNF792Q3KQV3 632 aa9.09□□□□□ -0.95
CHD1-204ENST00000505982 ANKRD24Q8TF21 1146 aa9.09□□□□□ -0.95
CHD1-204ENST00000505982 DNAJC2Q99543 621 aaKnown RBP9.09□□□□□ -0.95
CHD1-204ENST00000505982 SYNGAP1Q96PV0 1343 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 ECEL1O95672 775 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 LMNB1P20700 586 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 EIF4A3P38919 411 aaKnown RBP9.08□□□□□ -0.96
CHD1-204ENST00000505982 GJA8P48165 433 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 LIG3P49916 1009 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 PDE3AQ14432 1141 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 ZNF574Q6ZN55 896 aaPredicted RBP9.08□□□□□ -0.96
CHD1-204ENST00000505982 GMLQ99445 158 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHD1-204ENST00000505982 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
CHD1-204ENST00000505982 DYNC1LI2O43237 492 aaPredicted RBP9.07□□□□□ -0.96
CHD1-204ENST00000505982 ZNF157P51786 506 aaPredicted RBP9.07□□□□□ -0.96
CHD1-204ENST00000505982 ADAMTS1Q9UHI8 967 aa9.07□□□□□ -0.96
CHD1-204ENST00000505982 TLR6Q9Y2C9 796 aa9.07□□□□□ -0.96
CHD1-204ENST00000505982 FAM160A1Q05DH4 1040 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 PPP2R3AQ06190 1150 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 AP3B2Q13367 1082 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 RPS26P11Q5JNZ5 115 aaPredicted RBP9.06□□□□□ -0.96
CHD1-204ENST00000505982 SNAP47Q5SQN1 464 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 TTBK2Q6IQ55 1244 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 NECAB3Q96P71 396 aaPredicted RBP9.06□□□□□ -0.96
CHD1-204ENST00000505982 WDR18Q9BV38 432 aa9.06□□□□□ -0.96
CHD1-204ENST00000505982 ENC1O14682 589 aa9.05□□□□□ -0.96
CHD1-204ENST00000505982 ATF4P18848 351 aaPredicted RBP9.05□□□□□ -0.96
CHD1-204ENST00000505982 ZNF648Q5T619 568 aaPredicted RBP9.05□□□□□ -0.96
CHD1-204ENST00000505982 PHC3Q8NDX5 983 aa9.05□□□□□ -0.96
CHD1-204ENST00000505982 NETO1Q8TDF5 533 aa9.05□□□□□ -0.96
CHD1-204ENST00000505982 ZNF296Q8WUU4 475 aaPredicted RBP9.05□□□□□ -0.96
CHD1-204ENST00000505982 TMEM39AQ9NV64 488 aa9.05□□□□□ -0.96
CHD1-204ENST00000505982 PPP1R9AQ9ULJ8 1098 aa9.05□□□□□ -0.96
CHD1-204ENST00000505982 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
CHD1-204ENST00000505982 PF4P02776 101 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 FAAP100Q0VG06 881 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 BNIP3Q12983 259 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 ATG4DQ86TL0 474 aaPredicted RBP9.04□□□□□ -0.96
CHD1-204ENST00000505982 WFDC3Q8IUB2 231 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 SPATA32Q96LK8 384 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 SAMM50Q9Y512 469 aa9.04□□□□□ -0.96
CHD1-204ENST00000505982 SUPT16HQ9Y5B9 1047 aaKnown RBP9.04□□□□□ -0.96
CHD1-204ENST00000505982 FARP2O94887 1054 aaPredicted RBP9.03□□□□□ -0.96
CHD1-204ENST00000505982 SSBP05455 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD1-204ENST00000505982 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 PCNX4Q63HM2 1172 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 GOLM1Q8NBJ4 401 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 RHOVQ96L33 236 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 PIDD1Q9HB75 910 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
CHD1-204ENST00000505982 CARMIL2Q6F5E8 1435 aa9.03□□□□□ -0.96
CHD1-204ENST00000505982 PAGE1O75459 146 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 FGRP09769 529 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 FAM87AP0C7U9 286 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 FUT4P22083 530 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 CAMK2GQ13555 558 aaPredicted RBP9.02□□□□□ -0.97
CHD1-204ENST00000505982 FBXL19Q6PCT2 694 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 DPH6Q7L8W6 267 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 PLD6Q8N2A8 252 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms