RNA–Protein interactions for RNA: ENST00000505980.5

SSBP2-205, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-205ENST00000505980 NEDD4P46934 1319 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 MCM5P33992 734 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 TDO2P48775 406 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 MFSD14BQ5SR56 506 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 CC2D2BQ6DHV5 1058 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 NECAB1Q8N987 351 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 STAG1Q8WVM7 1258 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 BRF1Q92994 677 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 AATFQ9NY61 560 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSBP2-205ENST00000505980 SUGT1Q9Y2Z0 365 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
SSBP2-205ENST00000505980 TRIM66O15016 1216 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 PRC1O43663 620 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 PFKFB2O60825 505 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 BRD1O95696 1058 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 GTF2IP78347 998 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 CTDSPL2Q05D32 466 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 PPARAQ07869 468 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 RALYLQ86SE5 291 aaKnown RBP10.62□□□□□ -0.71
SSBP2-205ENST00000505980 GTF3C6Q969F1 213 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 FAM163AQ96GL9 167 aaPredicted RBP10.62□□□□□ -0.71
SSBP2-205ENST00000505980 CRNKL1Q9BZJ0 848 aaKnown RBP10.62□□□□□ -0.71
SSBP2-205ENST00000505980 MTFR1LQ9H019 292 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 DCP1AQ9NPI6 582 aaPredicted RBP10.62□□□□□ -0.71
SSBP2-205ENST00000505980 ATP8A2Q9NTI2 1148 aa10.62□□□□□ -0.71
SSBP2-205ENST00000505980 MKRN1Q9UHC7 482 aaKnown RBP10.62□□□□□ -0.71
SSBP2-205ENST00000505980 GAKO14976 1311 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 GPR75-ASB3A0A0A6YYF3 556 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 ZBTB7AO95365 584 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 SLC34A2O95436 690 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 LDHCP07864 332 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 FGRP09769 529 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 DPEP1P16444 411 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 APOBRQ0VD83 1088 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 TRDNQ13061 729 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 CTR9Q6PD62 1173 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 PODNQ7Z5L7 613 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 CERS5Q8N5B7 392 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 TTLL6Q8N841 843 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 ZNF274Q96GC6 653 aaPredicted RBP10.61□□□□□ -0.71
SSBP2-205ENST00000505980 CNNM2Q9H8M5 875 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 INCENPQ9NQS7 918 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 SMC3Q9UQE7 1217 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 SCN9AQ15858 1988 aa10.61□□□□□ -0.71
SSBP2-205ENST00000505980 DDX60LQ5H9U9 1706 aaKnown RBP10.6□□□□□ -0.71
SSBP2-205ENST00000505980 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
SSBP2-205ENST00000505980 NAV1Q8NEY1 1877 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 FOCADQ5VW36 1801 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 B4E1Z4 1266 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 PDIA3P30101 505 aaKnown RBP10.6□□□□□ -0.71
SSBP2-205ENST00000505980 MCM4P33991 863 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 TGFB2P61812 414 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 SCRN1Q12765 414 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 SBK1Q52WX2 424 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 MFSD6Q6ZSS7 791 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 CERS3Q8IU89 383 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
SSBP2-205ENST00000505980 KRT23Q9C075 422 aa10.6□□□□□ -0.71
SSBP2-205ENST00000505980 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
SSBP2-205ENST00000505980 USP17L12C9JPN9 530 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 USP17L21D6R901 530 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 SMIM22K7EJ46 135 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 SH2B2O14492 632 aaPredicted RBP10.59□□□□□ -0.71
SSBP2-205ENST00000505980 C21orf2O43822 256 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 BAG3O95817 575 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 GJB2P29033 226 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 FKBP1AP62942 108 aaKnown RBP10.59□□□□□ -0.71
SSBP2-205ENST00000505980 KIAA2012Q0VF49 1180 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 STK3Q13188 491 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 SLF2Q8IX21 1173 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 IGDCC4Q8TDY8 1250 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 TMEM87BQ96K49 555 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 MTA3Q9BTC8 594 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 GPBP1L1Q9HC44 474 aaPredicted RBP10.59□□□□□ -0.71
SSBP2-205ENST00000505980 ZSWIM5Q9P217 1185 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 BRPF3Q9ULD4 1205 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 PSME4Q14997 1843 aa10.59□□□□□ -0.71
SSBP2-205ENST00000505980 CYP2D7A0A087X1C5 515 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 MINDY4BA8MYZ0 360 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 ECE2O60344 883 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 KDM4AO75164 1064 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 PCP11498 1178 aaKnown RBP10.58□□□□□ -0.72
SSBP2-205ENST00000505980 SYT1P21579 422 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 POLD1P28340 1107 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 BTDP43251 543 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 RHBDL3P58872 404 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 PDE4DQ08499 809 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 R3HDM1Q15032 1099 aaKnown RBP10.58□□□□□ -0.72
SSBP2-205ENST00000505980 RTKN2Q8IZC4 609 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 SUPT20HQ8NEM7 779 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 GBP4Q96PP9 640 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 PSMD1Q99460 953 aa10.58□□□□□ -0.72
SSBP2-205ENST00000505980 LLPHQ9BRT6 129 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms