RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 ATP8B2P98198 1209 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 OS9Q13438 667 aaPredicted RBP13.98□□□□□ -0.17
SIL1-208ENST00000505945 POLA2Q14181 598 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 RRP1BQ14684 758 aaKnown RBP13.98□□□□□ -0.17
SIL1-208ENST00000505945 TNNI3KQ59H18 835 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 TREML2Q5T2D2 321 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 ANKRD13CQ8N6S4 541 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 NKX2-3Q8TAU0 364 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 DBNDD2Q9BQY9 259 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 COLQQ9Y215 455 aaPredicted RBP13.98□□□□□ -0.17
SIL1-208ENST00000505945 FPGT-TNNI3KV9GXZ4 949 aa13.98□□□□□ -0.17
SIL1-208ENST00000505945 TNPO2O14787 897 aaKnown RBP13.97□□□□□ -0.17
SIL1-208ENST00000505945 SURF6O75683 361 aaKnown RBP13.97□□□□□ -0.17
SIL1-208ENST00000505945 ELNP15502 786 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 CAP2P40123 477 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 UBXN2AP68543 259 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 CCDC158Q5M9N0 1113 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 TTC39AQ5SRH9 613 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
SIL1-208ENST00000505945 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 SLAIN1Q8ND83 568 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 DPF3Q92784 378 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 NOL10Q9BSC4 688 aaKnown RBP13.97□□□□□ -0.17
SIL1-208ENST00000505945 UNC93B1Q9H1C4 597 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 GPR108Q9NPR9 543 aa13.97□□□□□ -0.17
SIL1-208ENST00000505945 AATFQ9NY61 560 aaKnown RBP eCLIP13.97□□□□□ -0.17
SIL1-208ENST00000505945 TRIOBPQ9H2D6 2365 aa13.96□□□□□ -0.17
SIL1-208ENST00000505945 BAG3O95817 575 aa13.96□□□□□ -0.17
SIL1-208ENST00000505945 CYP2E1P05181 493 aaPredicted RBP13.96□□□□□ -0.17
SIL1-208ENST00000505945 HMGCS2P54868 508 aa13.96□□□□□ -0.17
SIL1-208ENST00000505945 PROCA1Q8NCQ7 364 aaPredicted RBP13.96□□□□□ -0.17
SIL1-208ENST00000505945 TGFBRAP1Q8WUH2 860 aa13.96□□□□□ -0.17
SIL1-208ENST00000505945 PI4KBQ9UBF8 816 aa13.96□□□□□ -0.17
SIL1-208ENST00000505945 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 COL2A1P02458 1487 aaPredicted RBP13.95□□□□□ -0.18
SIL1-208ENST00000505945 USP17L5A8MUK1 530 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 UBE2Q1Q7Z7E8 422 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 ADGRA1Q86SQ6 560 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 MAPKAPK5Q8IW41 473 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 U2AF1L4Q8WU68 220 aaKnown RBP13.95□□□□□ -0.18
SIL1-208ENST00000505945 HERC5Q9UII4 1024 aaKnown RBP13.95□□□□□ -0.18
SIL1-208ENST00000505945 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
SIL1-208ENST00000505945 ZBTB7BO15156 539 aaPredicted RBP13.94□□□□□ -0.18
SIL1-208ENST00000505945 SGPL1O95470 568 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 INHAP05111 366 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 ZAP70P43403 619 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 FXR1P51114 621 aaKnown RBP eCLIP13.94□□□□□ -0.18
SIL1-208ENST00000505945 PPP4CP60510 307 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 JAG1P78504 1218 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 IRF5Q13568 498 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
SIL1-208ENST00000505945 PXYLP1Q8TE99 480 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 COA7Q96BR5 231 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 DHX36Q9H2U1 1008 aaKnown RBP13.94□□□□□ -0.18
SIL1-208ENST00000505945 PALD1Q9ULE6 856 aa13.94□□□□□ -0.18
SIL1-208ENST00000505945 RLBP1P12271 317 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 PLCG2P16885 1265 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 GCLCP48506 637 aaPredicted RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
SIL1-208ENST00000505945 FAM110CQ1W6H9 321 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 SH3D19Q5HYK7 790 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 FOXP4Q8IVH2 680 aaPredicted RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 ZNF512BQ96KM6 892 aaPredicted RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
SIL1-208ENST00000505945 PIH1D3Q9NQM4 214 aaKnown RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 NOP58Q9Y2X3 529 aaKnown RBP13.93□□□□□ -0.18
SIL1-208ENST00000505945 FLT1P17948 1338 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 ATAD5Q96QE3 1844 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 TFRCP02786 760 aaKnown RBP13.92□□□□□ -0.18
SIL1-208ENST00000505945 DYNLL1P63167 89 aaKnown RBP13.92□□□□□ -0.18
SIL1-208ENST00000505945 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.18
SIL1-208ENST00000505945 MTMR2Q13614 643 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
SIL1-208ENST00000505945 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
SIL1-208ENST00000505945 EAF2Q96CJ1 260 aaPredicted RBP13.92□□□□□ -0.18
SIL1-208ENST00000505945 DEFB118Q96PH6 123 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 HTATIP2Q9BUP3 242 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 WDR18Q9BV38 432 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 DNAJC18Q9H819 358 aa13.92□□□□□ -0.18
SIL1-208ENST00000505945 SAP30BPQ9UHR5 308 aaKnown RBP13.92□□□□□ -0.18
SIL1-208ENST00000505945 MYO5AQ9Y4I1 1855 aaKnown RBP13.91□□□□□ -0.18
SIL1-208ENST00000505945 FARP2O94887 1054 aaPredicted RBP13.91□□□□□ -0.18
SIL1-208ENST00000505945 ASNSP08243 561 aa13.91□□□□□ -0.18
SIL1-208ENST00000505945 CYP7A1P22680 504 aa13.91□□□□□ -0.18
SIL1-208ENST00000505945 BACE1P56817 501 aa13.91□□□□□ -0.18
SIL1-208ENST00000505945 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
SIL1-208ENST00000505945 TRIM34Q9BYJ4 488 aa13.91□□□□□ -0.18
SIL1-208ENST00000505945 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
SIL1-208ENST00000505945 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
SIL1-208ENST00000505945 PEX10O60683 326 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms