RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MGAMO43451 1857 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
NEDD9-210ENST00000505589 C19orf81C9J6K1 198 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 IGSF3O75054 1194 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 BTDP43251 543 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 PICALMQ13492 652 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 MVPQ14764 893 aaKnown RBP12.26□□□□□ -0.45
NEDD9-210ENST00000505589 ALDH1L2Q3SY69 923 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 SOCS4Q8WXH5 440 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 DHX36Q9H2U1 1008 aaKnown RBP12.26□□□□□ -0.45
NEDD9-210ENST00000505589 TMOD4Q9NZQ9 345 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 GJD2Q9UKL4 321 aa12.26□□□□□ -0.45
NEDD9-210ENST00000505589 E9PSI1 815 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 SOX1O00570 391 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-210ENST00000505589 MAPK4P31152 587 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 HOXA7P31268 230 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-210ENST00000505589 CAP2P40123 477 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-210ENST00000505589 SIL1Q9H173 461 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 PI4KBQ9UBF8 816 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 ZSWIM8A7E2V4 1837 aa12.25□□□□□ -0.45
NEDD9-210ENST00000505589 MROH7-TTC4A0A0A0MT08 1334 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 GLRX3O76003 335 aaKnown RBP12.24□□□□□ -0.45
NEDD9-210ENST00000505589 BAG3O95817 575 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 ASNSP08243 561 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 PLCG2P16885 1265 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 PHKA1P46020 1223 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 GORABQ5T7V8 394 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 FAM109BQ6ICB4 259 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-210ENST00000505589 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 FOXP4Q8IVH2 680 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-210ENST00000505589 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 ASCC2Q9H1I8 757 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-210ENST00000505589 COPRSQ9NQ92 184 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
NEDD9-210ENST00000505589 ZMYND8Q9ULU4 1186 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-210ENST00000505589 MSCO60682 206 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 MAGEA10P43363 369 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-210ENST00000505589 HMGCS2P54868 508 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 BACE1P56817 501 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 TREML2Q5T2D2 321 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 ATF7IPQ6VMQ6 1270 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 FAM9BQ8IZU0 186 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 LBHD1Q9BQE6 289 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-210ENST00000505589 WDR18Q9BV38 432 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
NEDD9-210ENST00000505589 MTMR10Q9NXD2 777 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 PRKAG2Q9UGJ0 569 aa12.23□□□□□ -0.45
NEDD9-210ENST00000505589 USP17L10C9JJH3 530 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
NEDD9-210ENST00000505589 CYP2B6P20813 491 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 RGS2P41220 211 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 TIMM10P62072 90 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 CCNA1P78396 465 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 COL6A3P12111 3177 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
NEDD9-210ENST00000505589 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.45
NEDD9-210ENST00000505589 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.45
NEDD9-210ENST00000505589 MECOMQ03112 1051 aa12.21□□□□□ -0.45
NEDD9-210ENST00000505589 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.45
NEDD9-210ENST00000505589 DIS3LQ8TF46 1054 aaKnown RBP12.21□□□□□ -0.45
NEDD9-210ENST00000505589 XAGE2Q96GT9 111 aa12.21□□□□□ -0.45
NEDD9-210ENST00000505589 NEUROD6Q96NK8 337 aa12.21□□□□□ -0.45
NEDD9-210ENST00000505589 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
NEDD9-210ENST00000505589 DDX4Q9NQI0 724 aaKnown RBP12.21□□□□□ -0.45
NEDD9-210ENST00000505589 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.46
NEDD9-210ENST00000505589 A0A1B0GUL7 405 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 GNAI3P08754 354 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 UQCRFS1P1P0C7P4 283 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
NEDD9-210ENST00000505589 SYN1P17600 705 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 RHBDL3P58872 404 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 RASGRF1Q13972 1273 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 MFSD14CQ5VZR4 134 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 CERS3Q8IU89 383 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 NSUN4Q96CB9 384 aaKnown RBP12.2□□□□□ -0.46
NEDD9-210ENST00000505589 P2RX7Q99572 595 aaKnown RBP12.2□□□□□ -0.46
NEDD9-210ENST00000505589 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 RAI14Q9P0K7 980 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 A0A0C4DFX4 3053 aa12.2□□□□□ -0.46
NEDD9-210ENST00000505589 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 HERVK_113P62684 666 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 PLEKHH3Q7Z736 793 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 CRACR2BQ8N4Y2 399 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-210ENST00000505589 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 TRIB2Q92519 343 aa12.19□□□□□ -0.46
NEDD9-210ENST00000505589 EDC3Q96F86 508 aaKnown RBP12.19□□□□□ -0.46
NEDD9-210ENST00000505589 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms