RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 EVX2Q03828 476 aa22.56■■□□□ 1.2
SDHA-206ENST00000505555 CRACR2BQ8N4Y2 399 aaPredicted RBP22.56■■□□□ 1.2
SDHA-206ENST00000505555 NYXQ9GZU5 481 aa22.56■■□□□ 1.2
SDHA-206ENST00000505555 ANAPC4Q9UJX5 808 aa22.56■■□□□ 1.2
SDHA-206ENST00000505555 JAG2Q9Y219 1238 aa22.56■■□□□ 1.2
SDHA-206ENST00000505555 ECM29Q5VYK3 1845 aa22.56■■□□□ 1.2
SDHA-206ENST00000505555 TNKSO95271 1327 aa22.56■■□□□ 1.2
SDHA-206ENST00000505555 RC3H1Q5TC82 1133 aaKnown RBP22.55■■□□□ 1.2
SDHA-206ENST00000505555 TRIM22Q8IYM9 498 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 TMTC2Q8N394 836 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 ESR2Q92731 530 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 CCNL1Q9UK58 526 aaPredicted RBP22.55■■□□□ 1.2
SDHA-206ENST00000505555 CHAF1AQ13111 956 aaPredicted RBP22.55■■□□□ 1.2
SDHA-206ENST00000505555 SEC23AQ15436 765 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 ISM2Q6H9L7 571 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 SARM1Q6SZW1 724 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 SLC51AQ86UW1 340 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 NOSTRINQ8IVI9 506 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 NID2Q14112 1375 aa22.55■■□□□ 1.2
SDHA-206ENST00000505555 PPP6R2O75170 966 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 MMP1P03956 469 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 PRKCSHP14314 528 aaPredicted RBP22.54■■□□□ 1.2
SDHA-206ENST00000505555 MECOMQ03112 1051 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 ZRSR1Q15695 479 aaKnown RBP22.54■■□□□ 1.2
SDHA-206ENST00000505555 DIS3L2Q8IYB7 885 aaKnown RBP22.54■■□□□ 1.2
SDHA-206ENST00000505555 WASF1Q92558 559 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 ARHGEF1Q92888 912 aaKnown RBP22.54■■□□□ 1.2
SDHA-206ENST00000505555 CACNA1SQ13698 1873 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 SYKP43405 635 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 TPTE2Q6XPS3 522 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 TXNRD3Q86VQ6 643 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 NSUN4Q96CB9 384 aaKnown RBP22.54■■□□□ 1.2
SDHA-206ENST00000505555 NAT10Q9H0A0 1025 aaKnown RBP22.54■■□□□ 1.2
SDHA-206ENST00000505555 A0A1B0GUL6 1792 aa22.54■■□□□ 1.2
SDHA-206ENST00000505555 CASZ1Q86V15 1759 aa22.53■■□□□ 1.2
SDHA-206ENST00000505555 HIBADHP31937 336 aaKnown RBP22.53■■□□□ 1.2
SDHA-206ENST00000505555 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
SDHA-206ENST00000505555 CTR9Q6PD62 1173 aa22.53■■□□□ 1.2
SDHA-206ENST00000505555 ENAHQ8N8S7 591 aaPredicted RBP22.53■■□□□ 1.2
SDHA-206ENST00000505555 RTCBQ9Y3I0 505 aaKnown RBP22.53■■□□□ 1.2
SDHA-206ENST00000505555 NR5A1Q13285 461 aa22.53■■□□□ 1.2
SDHA-206ENST00000505555 JMYQ8N9B5 988 aa22.53■■□□□ 1.2
SDHA-206ENST00000505555 CACTINQ8WUQ7 758 aaKnown RBP22.53■■□□□ 1.2
SDHA-206ENST00000505555 AATFQ9NY61 560 aaKnown RBP eCLIP22.53■■□□□ 1.2
SDHA-206ENST00000505555 HPSEQ9Y251 543 aa22.53■■□□□ 1.2
SDHA-206ENST00000505555 ZNF831Q5JPB2 1677 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 CCDC196A0A1B0GTZ2 297 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 USP17L12C9JPN9 530 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 USP17L21D6R901 530 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 PRDX5P30044 214 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 SAFBQ15424 915 aaKnown RBP eCLIP22.52■■□□□ 1.2
SDHA-206ENST00000505555 SPECC1Q5M775 1068 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 ZSCAN10Q96SZ4 725 aaPredicted RBP22.52■■□□□ 1.2
SDHA-206ENST00000505555 MTA3Q9BTC8 594 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
SDHA-206ENST00000505555 hCG_1642624A0A1W2PR95 340 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 DEXIO95424 95 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 CDC25BP30305 580 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 TM4SF1P30408 202 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 ARID5BQ14865 1188 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 OXER1Q8TDS5 423 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 USP21Q9UK80 565 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 NPHP1O15259 732 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 MRFAP1L1Q96HT8 127 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 SCN7AQ01118 1682 aa22.51■■□□□ 1.19
SDHA-206ENST00000505555 RESP18Q5W5W9 173 aa22.5■■□□□ 1.19
SDHA-206ENST00000505555 FNBP4Q8N3X1 1017 aaPredicted RBP22.5■■□□□ 1.19
SDHA-206ENST00000505555 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.5■■□□□ 1.19
SDHA-206ENST00000505555 RGL2O15211 777 aa22.5■■□□□ 1.19
SDHA-206ENST00000505555 NLRP12P59046 1061 aa22.5■■□□□ 1.19
SDHA-206ENST00000505555 RBM10P98175 930 aaKnown RBP22.5■■□□□ 1.19
SDHA-206ENST00000505555 SHISA4Q96DD7 197 aa22.5■■□□□ 1.19
SDHA-206ENST00000505555 ANKRD2Q9GZV1 360 aa22.5■■□□□ 1.19
SDHA-206ENST00000505555 BAZ2AQ9UIF9 1905 aaKnown RBP22.5■■□□□ 1.19
SDHA-206ENST00000505555 SEMA3EO15041 775 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 ATP2B1P20020 1258 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
SDHA-206ENST00000505555 GRIN1Q05586 938 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 PNOCQ13519 176 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 IFIT1BQ5T764 474 aaKnown RBP22.49■■□□□ 1.19
SDHA-206ENST00000505555 PDCL3Q9H2J4 239 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 CUTAO60888 179 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 LONRF3Q496Y0 759 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 TIGD1Q96MW7 591 aa22.49■■□□□ 1.19
SDHA-206ENST00000505555 NMT2O60551 498 aa22.48■■□□□ 1.19
SDHA-206ENST00000505555 CYP2D6P10635 497 aa22.48■■□□□ 1.19
SDHA-206ENST00000505555 SLC4A8Q2Y0W8 1093 aa22.48■■□□□ 1.19
SDHA-206ENST00000505555 FOXP1Q9H334 677 aaPredicted RBP22.48■■□□□ 1.19
SDHA-206ENST00000505555 PCDHB6Q9Y5E3 794 aa22.48■■□□□ 1.19
SDHA-206ENST00000505555 BTAF1O14981 1849 aa22.48■■□□□ 1.19
SDHA-206ENST00000505555 PLEKHA8P1O95397 391 aa22.47■■□□□ 1.19
SDHA-206ENST00000505555 RCAN1P53805 252 aa22.47■■□□□ 1.19
SDHA-206ENST00000505555 FILIP1Q7Z7B0 1213 aa22.47■■□□□ 1.19
SDHA-206ENST00000505555 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
SDHA-206ENST00000505555 DCP1AQ9NPI6 582 aaPredicted RBP22.47■■□□□ 1.19
SDHA-206ENST00000505555 KCNH3Q9ULD8 1083 aa22.47■■□□□ 1.19
SDHA-206ENST00000505555 DYNC1I1O14576 645 aa22.47■■□□□ 1.19
SDHA-206ENST00000505555 FAM47AQ5JRC9 791 aa22.47■■□□□ 1.19
SDHA-206ENST00000505555 VPS54Q9P1Q0 977 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms