RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ZNF354CQ86Y25 554 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 NONOQ15233 471 aaKnown RBP eCLIP18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 SMTNP53814 917 aa18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 CCDC6Q16204 474 aa18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 CETN3O15182 167 aa18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 ZFP91Q96JP5 570 aaPredicted RBP18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 AKNAD1Q5T1N1 836 aa18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 DPH6Q7L8W6 267 aa18.5■□□□□ 0.55
PCDHA1-203ENST00000504120 PRDM1O75626 825 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 FAM76AQ8TAV0 307 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 FNBP1Q96RU3 617 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 ABCC4O15439 1325 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 TXKP42681 527 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 ZBTB16Q05516 673 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 OTUD7BQ6GQQ9 843 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 APBB1IPQ7Z5R6 666 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 ORAI2Q96SN7 254 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 TNFAIP3P21580 790 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 CPLX4Q7Z7G2 160 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 ZNF532Q9HCE3 1301 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 KIAA1524Q8TCG1 905 aa18.49■□□□□ 0.55
PCDHA1-203ENST00000504120 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 ZAP70P43403 619 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 CCDC63Q8NA47 563 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 SMC6Q96SB8 1091 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 PSMD1Q99460 953 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 TLDC2A0PJX2 215 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 CDC37L1Q7L3B6 337 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 AATFQ9NY61 560 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 ADCY7P51828 1080 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 CTDSPL2Q05D32 466 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 LRWD1Q9UFC0 647 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 TAF5LO75529 589 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 FCHSD1Q86WN1 690 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 TMTC1Q8IUR5 882 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 CSRNP2Q9H175 543 aa18.48■□□□□ 0.55
PCDHA1-203ENST00000504120 KDM5CP41229 1560 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 E7EWF7 191 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 BIRC3Q13489 604 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 CCDC25Q86WR0 208 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 OTUD6BQ8N6M0 293 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 LMBRD1Q9NUN5 540 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 EXOC7Q9UPT5 735 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 NEURL1BA8MQ27 555 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 ZEB2O60315 1214 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 DKC1O60832 514 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 POSTNQ15063 836 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 CCDC114Q96M63 670 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 TXNDC16Q9P2K2 825 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 ASIC2Q16515 512 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 VTI1AQ96AJ9 217 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 PPM1FP49593 454 aaPredicted RBP18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 SP4Q02446 784 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 CEP128Q6ZU80 1094 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 CLEC11AQ9Y240 323 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
PCDHA1-203ENST00000504120 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 PHKBQ93100 1093 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 ARHGAP6O43182 974 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 BRD1O95696 1058 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 KRT5P13647 590 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 SMIM23A6NLE4 172 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 DNAJC10Q8IXB1 793 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 SAMD15Q9P1V8 674 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 NFE2L3Q9Y4A8 694 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 SPOPO43791 374 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 STX10O60499 249 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 NBPF14Q5TI25 921 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 SNX29Q8TEQ0 813 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 MAPK8IP1Q9UQF2 711 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 ADCY10Q96PN6 1610 aa18.46■□□□□ 0.55
PCDHA1-203ENST00000504120 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 HSPA2P54652 639 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 EIF6P56537 245 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 GPR161Q8N6U8 529 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 UBLCP1Q8WVY7 318 aaPredicted RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 NOX5Q96PH1 765 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 MYL10Q9BUA6 226 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 PKD2L1Q9P0L9 805 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 CHMP2AO43633 222 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 MAK16Q9BXY0 300 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 GADD45BO75293 160 aaPredicted RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 SLC9C1Q4G0N8 1177 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 C8orf74Q6P047 294 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 IPO4Q8TEX9 1081 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 GTF3C6Q969F1 213 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 ARHGEF35A5YM69 484 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 ATP5DP30049 168 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 SPATA24Q86W54 205 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 IFT74Q96LB3 600 aa18.45■□□□□ 0.54
PCDHA1-203ENST00000504120 KCNK9Q9NPC2 374 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms