RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 MYBL2P10244 700 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 CCNFP41002 786 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 HTR3AP46098 478 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 MAP2K1Q02750 393 aaPredicted RBP4.46□□□□□ -1.7
SUB1-202ENST00000502453 COL9A2Q14055 689 aaPredicted RBP4.46□□□□□ -1.7
SUB1-202ENST00000502453 SH3PXD2AQ5TCZ1 1133 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 AGAP9Q5VTM2 703 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 SH3RF1Q7Z6J0 888 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 FAM186BQ8IYM0 893 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 IFT43Q96FT9 208 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 TMEM87BQ96K49 555 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 SCUBE2Q9NQ36 999 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 RRN3Q9NYV6 651 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 GTF2IRD1Q9UHL9 959 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 GIPC1O14908 333 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 TIPRLO75663 272 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 CCNYL3P0C7X3 344 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 MINDY4Q4G0A6 757 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 C16orf54Q6UWD8 224 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 ARL10Q8N8L6 244 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 NUDT12Q9BQG2 462 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 SH3GLB2Q9NR46 395 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.46□□□□□ -1.7
SUB1-202ENST00000502453 KPNA6O60684 536 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 MTA2O94776 668 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 MICAL2O94851 1124 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 INMTO95050 263 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 MT-CO1P00395 513 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 IFIT1P09914 478 aaKnown RBP4.45□□□□□ -1.7
SUB1-202ENST00000502453 RGS3P49796 1198 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 RUFY4Q6ZNE9 571 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 PAWRQ96IZ0 340 aaKnown RBP4.45□□□□□ -1.7
SUB1-202ENST00000502453 CSRNP2Q9H175 543 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 NLRC4Q9NPP4 1024 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 RAI14Q9P0K7 980 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 MAPRE3Q9UPY8 281 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 SMTNL1A8MU46 457 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 GOLGA6L6A8MZA4 724 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 MAP3K6O95382 1288 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 WASHC5Q12768 1159 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 FAM133BQ5BKY9 247 aaKnown RBP4.45□□□□□ -1.7
SUB1-202ENST00000502453 CDC6Q99741 560 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 FNIP2Q9P278 1114 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 MAP4K5Q9Y4K4 846 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 ABLIM3O94929 683 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 SETSIPP0DME0 302 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 KRT20P35900 424 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 GTF2A2P52657 109 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 FCGRTP55899 365 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 G3BP1Q13283 466 aaKnown RBP eCLIP4.45□□□□□ -1.73e-7■□□□□ 10.9
SUB1-202ENST00000502453 MRM1Q6IN84 353 aaKnown RBP4.45□□□□□ -1.7
SUB1-202ENST00000502453 TPTE2Q6XPS3 522 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 KRT77Q7Z794 578 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 TREML1Q86YW5 311 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 STK11IPQ8N1F8 1099 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 ACRBPQ8NEB7 543 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.45□□□□□ -1.7
SUB1-202ENST00000502453 CLUHP3Q96NS8 147 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 USP20Q9Y2K6 914 aa4.45□□□□□ -1.7
SUB1-202ENST00000502453 SNUPNO95149 360 aaKnown RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 EYA4O95677 639 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 PYGLP06737 847 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 SDSP20132 328 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 CHKAP35790 457 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 SCNN1DP51172 638 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 GRIN2CQ14957 1233 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 TUBB8Q3ZCM7 444 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 JARID2Q92833 1246 aaPredicted RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 SUCOQ9UBS9 1254 aaKnown RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 ABCF2Q9UG63 623 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 SMC3Q9UQE7 1217 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 SYNDIG1LA6NDD5 238 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 FAM205CA6NFA0 338 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 TMEM127O75204 238 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 HMMRO75330 724 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 NAT1P18440 290 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 GSTT1P30711 240 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 CAMK2GQ13555 558 aaPredicted RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 ELF2Q15723 593 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 ERFEQ4G0M1 354 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 ZC3H12AQ5D1E8 599 aaKnown RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 DNAJC21Q5F1R6 531 aaKnown RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 FAM178BQ8IXR5 827 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 CCDC24Q8N4L8 307 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 GPKOWQ92917 476 aaPredicted RBP eCLIP4.44□□□□□ -1.7
SUB1-202ENST00000502453 TBC1D31Q96DN5 1066 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 SLC12A5Q9H2X9 1139 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 ANLNQ9NQW6 1124 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 MAN1C1Q9NR34 630 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 PARP3Q9Y6F1 533 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 PABPN1LA6NDY0 278 aaKnown RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 FAM86C2PA6NEL3 165 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 SLC5A1P13866 664 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 JUNDP17535 347 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 ID4P47928 161 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 MYLK4Q86YV6 388 aaPredicted RBP4.44□□□□□ -1.7
SUB1-202ENST00000502453 GJA10Q969M2 543 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 DHRS4Q9BTZ2 278 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 LGR6Q9HBX8 967 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms