RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 J3KRW8 73 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 PF4P02776 101 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 STT3AP46977 705 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 PDE1CQ14123 709 aaPredicted RBP8.66□□□□□ -1.02
NEB-216ENST00000497809 SEZ6Q53EL9 994 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
NEB-216ENST00000497809 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 MZT2BQ6NZ67 158 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 ST13P5Q8NFI4 369 aaPredicted RBP8.66□□□□□ -1.02
NEB-216ENST00000497809 CCDC47Q96A33 483 aaKnown RBP8.66□□□□□ -1.02
NEB-216ENST00000497809 NCOA5Q9HCD5 579 aaKnown RBP8.66□□□□□ -1.02
NEB-216ENST00000497809 NLRC4Q9NPP4 1024 aa8.66□□□□□ -1.02
NEB-216ENST00000497809 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
NEB-216ENST00000497809 hCG_1642624A0A1W2PR95 340 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 POTECB2RU33 542 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
NEB-216ENST00000497809 SLC5A1P13866 664 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 TRIM14Q14142 442 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 EPM2AIP1Q7L775 607 aaPredicted RBP8.65□□□□□ -1.02
NEB-216ENST00000497809 RPAINQ86UA6 219 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 PHC3Q8NDX5 983 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.65□□□□□ -1.02
NEB-216ENST00000497809 SRCIN1Q9C0H9 1055 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 SMYD2Q9NRG4 433 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 MAP4K5Q9Y4K4 846 aa8.65□□□□□ -1.02
NEB-216ENST00000497809 DNAJC25-GNG10A0A024R161 153 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 INMTO95050 263 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 L1CAMP32004 1257 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 HSP90AB3PQ58FF7 597 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 SYDE2Q5VT97 1194 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 RNF219Q5W0B1 726 aaPredicted RBP8.64□□□□□ -1.03
NEB-216ENST00000497809 MPNDQ8N594 471 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 SLC7A3Q8WY07 619 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 BAP1Q92560 729 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 CDK5RAP3Q96JB5 506 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 FBXO24O75426 580 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 GDF10P55107 478 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 LAMC2Q13753 1193 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 HSP90AA2PQ14568 343 aaPredicted RBP8.64□□□□□ -1.03
NEB-216ENST00000497809 MINDY4Q4G0A6 757 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 KIAA1614Q5VZ46 1190 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 C3orf58Q8NDZ4 430 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 ZNF496Q96IT1 587 aaPredicted RBP8.64□□□□□ -1.03
NEB-216ENST00000497809 NGLY1Q96IV0 654 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 ESYT1Q9BSJ8 1104 aa8.64□□□□□ -1.03
NEB-216ENST00000497809 TSR3Q9UJK0 312 aaKnown RBP8.64□□□□□ -1.03
NEB-216ENST00000497809 FRMPD2Q68DX3 1309 aaPredicted RBP8.63□□□□□ -1.03
NEB-216ENST00000497809 SETSIPP0DME0 302 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 CCNFP41002 786 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 GJA9P57773 515 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEB-216ENST00000497809 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 LMNTD2Q8IXW0 634 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 ARMC2Q8NEN0 867 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
NEB-216ENST00000497809 DDX21Q9NR30 783 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEB-216ENST00000497809 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.63□□□□□ -1.03
NEB-216ENST00000497809 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 WASHC2AQ641Q2 1341 aa8.63□□□□□ -1.03
NEB-216ENST00000497809 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
NEB-216ENST00000497809 MAP3K6O95382 1288 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 CPEP16870 476 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 JUNDP17535 347 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 CAPN3P20807 821 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 FLT3P36888 993 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 PBX2P40425 430 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 MAPK9P45984 424 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 TMPRSS15P98073 1019 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 FOXK2Q01167 660 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 PTPN21Q16825 1174 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 DNAJC21Q5F1R6 531 aaKnown RBP8.62□□□□□ -1.03
NEB-216ENST00000497809 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 NKAIN3Q8N8D7 197 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 NAA15Q9BXJ9 866 aaKnown RBP8.62□□□□□ -1.03
NEB-216ENST00000497809 TMEM51Q9NW97 253 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 KLK14Q9P0G3 267 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 FBXO10Q9UK96 956 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 POLR3DP05423 398 aaPredicted RBP8.62□□□□□ -1.03
NEB-216ENST00000497809 DGKZQ13574 1117 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 AGAP9Q5VTM2 703 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 FAM186BQ8IYM0 893 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 KHSRPQ92945 711 aaKnown RBP eCLIP8.62□□□□□ -1.03
NEB-216ENST00000497809 LRGUKQ96M69 825 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 KCNK17Q96T54 332 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 KIF2CQ99661 725 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 SPATA9Q9BWV2 254 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 AP1M1Q9BXS5 423 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.62□□□□□ -1.03
NEB-216ENST00000497809 BLOC1S4Q9NUP1 217 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 TMCC3Q9ULS5 477 aa8.62□□□□□ -1.03
NEB-216ENST00000497809 TMX2Q9Y320 296 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms