RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
COMMD6-212ENST00000497707 SAP30BPQ9UHR5 308 aaKnown RBP13□□□□□ -0.33
COMMD6-212ENST00000497707 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
COMMD6-212ENST00000497707 MYO3BQ8WXR4 1341 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 KDM4AO75164 1064 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 MCM5P33992 734 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 NECAB1Q8N987 351 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 JDP2Q8WYK2 163 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 BRF1Q92994 677 aa12.99□□□□□ -0.33
COMMD6-212ENST00000497707 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
COMMD6-212ENST00000497707 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
COMMD6-212ENST00000497707 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
COMMD6-212ENST00000497707 ZNF541Q9H0D2 1346 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
COMMD6-212ENST00000497707 ORC4O43929 436 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 PRDM1O75626 825 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 CACNB3P54284 484 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 IDI2Q9BXS1 227 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 KRT23Q9C075 422 aa12.98□□□□□ -0.33
COMMD6-212ENST00000497707 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
COMMD6-212ENST00000497707 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
COMMD6-212ENST00000497707 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 PDIA3P30101 505 aaKnown RBP12.97□□□□□ -0.33
COMMD6-212ENST00000497707 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
COMMD6-212ENST00000497707 GABPAQ06546 454 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 TNIP1Q15025 636 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 SEC23AQ15436 765 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 SLC44A5Q8NCS7 719 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
COMMD6-212ENST00000497707 CNNM2Q9H8M5 875 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
COMMD6-212ENST00000497707 PFKFB2O60825 505 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 EGFRP00533 1210 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 CDK8P49336 464 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 TRDNQ13061 729 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 PICALMQ13492 652 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 RRP12Q5JTH9 1297 aaKnown RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 OSBPL5Q9H0X9 879 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-212ENST00000497707 PGAP2Q9UHJ9 254 aa12.96□□□□□ -0.33
COMMD6-212ENST00000497707 DDTLA6NHG4 134 aaPredicted RBP12.95□□□□□ -0.34
COMMD6-212ENST00000497707 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
COMMD6-212ENST00000497707 LMNB1P20700 586 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 RASA1P20936 1047 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 GMPSP49915 693 aaPredicted RBP12.95□□□□□ -0.34
COMMD6-212ENST00000497707 SCRN1Q12765 414 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 FAM47AQ5JRC9 791 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 C16orf86Q6ZW13 317 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 DPF2Q92785 391 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 TMEM87BQ96K49 555 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 MTA3Q9BTC8 594 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 IL17RBQ9NRM6 502 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
COMMD6-212ENST00000497707 NMT2O60551 498 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 RPS12P25398 132 aaKnown RBP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 LIFRP42702 1097 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 STK3Q13188 491 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 DLGAP5Q15398 846 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 SGMS1Q86VZ5 419 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 FAM217BQ9NTX9 383 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 ANGEL1Q9UNK9 670 aaKnown RBP12.94□□□□□ -0.34
COMMD6-212ENST00000497707 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
COMMD6-212ENST00000497707 WNT10BO00744 389 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 SOCS7O14512 581 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 IFIT3O14879 490 aaKnown RBP12.93□□□□□ -0.34
COMMD6-212ENST00000497707 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
COMMD6-212ENST00000497707 ENTPD3O75355 529 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 TFAP4Q01664 338 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 PDE4BQ07343 736 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 TCP10Q12799 353 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 PKP1Q13835 747 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
COMMD6-212ENST00000497707 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
COMMD6-212ENST00000497707 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
COMMD6-212ENST00000497707 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms