RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CHADLQ6NUI6 762 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 ZFPM1Q8IX07 1006 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 CSRNP1Q96S65 589 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 TMEM39BQ9GZU3 492 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 CNNM2Q9H8M5 875 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 GINM1Q9NU53 330 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 LAMA4Q16363 1823 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 SLC27A2O14975 620 aa23.44■■□□□ 1.34
SCAMP3-209ENST00000497470 ORC4O43929 436 aa23.44■■□□□ 1.34
SCAMP3-209ENST00000497470 AKNAD1Q5T1N1 836 aa23.44■■□□□ 1.34
SCAMP3-209ENST00000497470 ZSCAN29Q8IWY8 852 aaPredicted RBP23.44■■□□□ 1.34
SCAMP3-209ENST00000497470 BAZ2AQ9UIF9 1905 aaKnown RBP23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 PLCD1P51178 756 aa23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 TATDN1Q6P1N9 297 aa23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 RBM46Q8TBY0 533 aaKnown RBP23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 CCDC17Q96LX7 622 aa23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 MTA3Q9BTC8 594 aa23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 CLEC11AQ9Y240 323 aa23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.43■■□□□ 1.34
SCAMP3-209ENST00000497470 LAMB1P07942 1786 aa23.42■■□□□ 1.34
SCAMP3-209ENST00000497470 POLR2AP24928 1970 aaKnown RBP23.42■■□□□ 1.34
SCAMP3-209ENST00000497470 TOMM70O94826 608 aa23.42■■□□□ 1.34
SCAMP3-209ENST00000497470 NF2P35240 595 aa23.42■■□□□ 1.34
SCAMP3-209ENST00000497470 FKBP1BP68106 108 aa23.42■■□□□ 1.34
SCAMP3-209ENST00000497470 TM6SF1Q9BZW5 370 aa23.42■■□□□ 1.34
SCAMP3-209ENST00000497470 MINDY4BA8MYZ0 360 aa23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 HMGB1P09429 215 aaKnown RBP23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 MAP3K11Q16584 847 aa23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 MFSD6Q6ZSS7 791 aa23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 ZNF784Q8NCA9 323 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 ZNF526Q8TF50 670 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 KRT23Q9C075 422 aa23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 SAP30BPQ9UHR5 308 aaKnown RBP23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 ZNF112Q9UJU3 913 aa23.41■■□□□ 1.34
SCAMP3-209ENST00000497470 FSTL1Q12841 308 aa23.4■■□□□ 1.34
SCAMP3-209ENST00000497470 USP48Q86UV5 1035 aa23.4■■□□□ 1.34
SCAMP3-209ENST00000497470 SMC1BQ8NDV3 1235 aa23.4■■□□□ 1.34
SCAMP3-209ENST00000497470 C22orf23Q9BZE7 217 aa23.4■■□□□ 1.34
SCAMP3-209ENST00000497470 ITGBL1O95965 494 aaPredicted RBP23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 POTEIP0CG38 1075 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 POTEJP0CG39 1038 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 PSMA5P28066 241 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 CDK8P49336 464 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 TRDNQ13061 729 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 NBPF12Q5TAG4 269 aaPredicted RBP23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 CRACR2BQ8N4Y2 399 aaPredicted RBP23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 TBC1D32Q96NH3 1257 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 NBPF3Q9H094 633 aa23.39■■□□□ 1.33
SCAMP3-209ENST00000497470 WDR19Q8NEZ3 1342 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 PPP1R12BO60237 982 aaPredicted RBP23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 PPP4R3BQ5MIZ7 849 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 CDCA5Q96FF9 252 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 TRIM34Q9BYJ4 488 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 ZNF341Q9BYN7 854 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 SNX14Q9Y5W7 946 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 SIPA1L1O43166 1804 aa23.38■■□□□ 1.33
SCAMP3-209ENST00000497470 E7EWF7 191 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 CYP2D6P10635 497 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 CCDC178Q5BJE1 867 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 MAP1SQ66K74 1059 aaPredicted RBP23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 TBC1D10CQ8IV04 446 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 NCOA7Q8NI08 942 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 ESR2Q92731 530 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 DNAJC18Q9H819 358 aa23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCAMP3-209ENST00000497470 CYP2D7A0A087X1C5 515 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 ADM5C9JUS6 153 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 CTNND1O60716 968 aaKnown RBP23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 SHMT1P34896 483 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 RASEFQ8IZ41 740 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 FBXL16Q8N461 479 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 MKNK2Q9HBH9 465 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 TCP11L1Q9NUJ3 509 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 PLIN4Q96Q06 1357 aa23.36■■□□□ 1.33
SCAMP3-209ENST00000497470 PHF20L1A8MW92 1017 aa23.35■■□□□ 1.33
SCAMP3-209ENST00000497470 RASA1P20936 1047 aa23.35■■□□□ 1.33
SCAMP3-209ENST00000497470 HAND2P61296 217 aa23.35■■□□□ 1.33
SCAMP3-209ENST00000497470 ZNF444Q8N0Y2 327 aaPredicted RBP23.35■■□□□ 1.33
SCAMP3-209ENST00000497470 PASKQ96RG2 1323 aa23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 CTDSPL2Q05D32 466 aa23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 NOL9Q5SY16 702 aaKnown RBP23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 RALYLQ86SE5 291 aaKnown RBP23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 KLRG1Q96E93 195 aa23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 NEK1Q96PY6 1258 aa23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 TBC1D2Q9BYX2 928 aa23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 SSC5DA1L4H1 1573 aa23.34■■□□□ 1.33
SCAMP3-209ENST00000497470 CAP2P40123 477 aa23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 IREB2P48200 963 aaKnown RBP23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 CERKLQ49MI3 558 aaPredicted RBP23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 ARMC9Q7Z3E5 817 aa23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 NEDD1Q8NHV4 660 aa23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 DYNLL2Q96FJ2 89 aa23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 ZSWIM6Q9HCJ5 1215 aa23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 SYNPO2Q9UMS6 1093 aa23.33■■□□□ 1.33
SCAMP3-209ENST00000497470 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
SCAMP3-209ENST00000497470 NOVP48745 357 aa23.32■■□□□ 1.32
SCAMP3-209ENST00000497470 STOX1Q6ZVD7 989 aa23.32■■□□□ 1.32
SCAMP3-209ENST00000497470 CDAN1Q8IWY9 1227 aa23.32■■□□□ 1.32
SCAMP3-209ENST00000497470 MB21D2Q8IYB1 491 aaPredicted RBP23.32■■□□□ 1.32
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