RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TTLL10Q6ZVT0 673 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 SYDE1Q6ZW31 735 aaPredicted RBP6.22□□□□□ -1.41
VPS26A-208ENST00000497022 LIN37Q96GY3 246 aaPredicted RBP6.22□□□□□ -1.41
VPS26A-208ENST00000497022 ASB16Q96NS5 453 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 PRDM7Q9NQW5 492 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 GTF2IRD1Q9UHL9 959 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 HCLS1P14317 486 aaPredicted RBP6.21□□□□□ -1.42
VPS26A-208ENST00000497022 MAPK8P45983 427 aa6.21□□□□□ -1.42
VPS26A-208ENST00000497022 ZNF157P51786 506 aaPredicted RBP6.21□□□□□ -1.42
VPS26A-208ENST00000497022 FMR1Q06787 632 aaKnown RBP eCLIP6.21□□□□□ -1.42
VPS26A-208ENST00000497022 NXPE4Q6UWF7 544 aa6.21□□□□□ -1.42
VPS26A-208ENST00000497022 DTHD1Q6ZMT9 781 aa6.21□□□□□ -1.42
VPS26A-208ENST00000497022 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
VPS26A-208ENST00000497022 LMCD1Q9NZU5 365 aa6.21□□□□□ -1.42
VPS26A-208ENST00000497022 NFIBO00712 420 aa6.2□□□□□ -1.42
VPS26A-208ENST00000497022 GSTP1P09211 210 aaKnown RBP6.2□□□□□ -1.42
VPS26A-208ENST00000497022 XRCC5P13010 732 aaKnown RBP6.2□□□□□ -1.42
VPS26A-208ENST00000497022 CLCN7P51798 805 aa6.2□□□□□ -1.42
VPS26A-208ENST00000497022 AMIGO3Q86WK7 504 aa6.2□□□□□ -1.42
VPS26A-208ENST00000497022 SPACA3Q8IXA5 215 aa6.2□□□□□ -1.42
VPS26A-208ENST00000497022 HEXIM2Q96MH2 286 aaKnown RBP6.2□□□□□ -1.42
VPS26A-208ENST00000497022 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
VPS26A-208ENST00000497022 NEFMP07197 916 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 MPZL3Q6UWV2 235 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 FBF1Q8TES7 1133 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 ISL2Q96A47 359 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 KIRREL1Q96J84 757 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 WWC3Q9ULE0 1092 aa6.19□□□□□ -1.42
VPS26A-208ENST00000497022 KRT1P04264 644 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 FYB2Q5VWT5 728 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 PRR23BQ6ZRT6 265 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS26A-208ENST00000497022 FBXO15Q8NCQ5 510 aaPredicted RBP6.18□□□□□ -1.42
VPS26A-208ENST00000497022 RNF214Q8ND24 703 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 SETDB2Q96T68 719 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 ZC3H12CQ9C0D7 883 aaKnown RBP6.18□□□□□ -1.42
VPS26A-208ENST00000497022 SSU72Q9NP77 194 aaKnown RBP6.18□□□□□ -1.42
VPS26A-208ENST00000497022 TMEM39AQ9NV64 488 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 AKAP2Q9Y2D5 859 aa6.18□□□□□ -1.42
VPS26A-208ENST00000497022 C1QTNF9P0C862 333 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 PDIA4P13667 645 aaKnown RBP6.17□□□□□ -1.42
VPS26A-208ENST00000497022 ERVK-24P63145 666 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 TMEM67Q5HYA8 995 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 ALG1LQ6GMV1 187 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 CYFIP1Q7L576 1253 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 AEBP1Q8IUX7 1158 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 C3orf58Q8NDZ4 430 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 OSBPL7Q9BZF2 842 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 GPN3Q9UHW5 284 aaPredicted RBP6.17□□□□□ -1.42
VPS26A-208ENST00000497022 PITPNM2Q9BZ72 1349 aa6.17□□□□□ -1.42
VPS26A-208ENST00000497022 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
VPS26A-208ENST00000497022 ATP2B2Q01814 1243 aa6.16□□□□□ -1.42
VPS26A-208ENST00000497022 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
VPS26A-208ENST00000497022 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
VPS26A-208ENST00000497022 PDZD3Q86UT5 571 aa6.16□□□□□ -1.42
VPS26A-208ENST00000497022 SRCIN1Q9C0H9 1055 aa6.16□□□□□ -1.42
VPS26A-208ENST00000497022 GNAT3A8MTJ3 354 aa6.15□□□□□ -1.42
VPS26A-208ENST00000497022 GIPC1O14908 333 aa6.15□□□□□ -1.42
VPS26A-208ENST00000497022 P4HBP07237 508 aaKnown RBP6.15□□□□□ -1.42
VPS26A-208ENST00000497022 GSTT1P30711 240 aa6.15□□□□□ -1.42
VPS26A-208ENST00000497022 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
VPS26A-208ENST00000497022 ARNTP27540 789 aa6.14□□□□□ -1.43
VPS26A-208ENST00000497022 GDNFP39905 211 aa6.14□□□□□ -1.43
VPS26A-208ENST00000497022 SND1Q7KZF4 910 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS26A-208ENST00000497022 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
VPS26A-208ENST00000497022 KCNB2Q92953 911 aa6.14□□□□□ -1.43
VPS26A-208ENST00000497022 CCDC120Q96HB5 630 aa6.14□□□□□ -1.43
VPS26A-208ENST00000497022 LDHBP07195 334 aaKnown RBP6.13□□□□□ -1.43
VPS26A-208ENST00000497022 MED14OSP0DP75 135 aa6.13□□□□□ -1.43
VPS26A-208ENST00000497022 NME2P22392 152 aa6.13□□□□□ -1.43
VPS26A-208ENST00000497022 SULF2Q8IWU5 870 aa6.13□□□□□ -1.43
VPS26A-208ENST00000497022 NECAB3Q96P71 396 aaPredicted RBP6.13□□□□□ -1.43
VPS26A-208ENST00000497022 CD320Q9NPF0 282 aa6.13□□□□□ -1.43
VPS26A-208ENST00000497022 SPG7Q9UQ90 795 aa6.13□□□□□ -1.43
VPS26A-208ENST00000497022 MAPK8IP1Q9UQF2 711 aa6.13□□□□□ -1.43
VPS26A-208ENST00000497022 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 INHBBP09529 407 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 TMEM253P0C7T8 217 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 KCNA10Q16322 511 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 TPTE2Q6XPS3 522 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 NPAS4Q8IUM7 802 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 EMILIN2Q9BXX0 1053 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 FOXQ1Q9C009 403 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 NSUN3Q9H649 340 aaKnown RBP6.12□□□□□ -1.43
VPS26A-208ENST00000497022 C12orf49Q9H741 205 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 CARS2Q9HA77 564 aaKnown RBP6.12□□□□□ -1.43
VPS26A-208ENST00000497022 C19orf73Q9NVV2 129 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 PPM1HQ9ULR3 514 aa6.12□□□□□ -1.43
VPS26A-208ENST00000497022 ANKRD33BA6NCL7 494 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 ENC1O14682 589 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 FBXO24O75426 580 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 BMP6P22004 513 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 CTSWP56202 376 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 CIAPIN1Q6FI81 312 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 ANKRD24Q8TF21 1146 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 FRMD6Q96NE9 622 aa6.11□□□□□ -1.43
VPS26A-208ENST00000497022 DIRC2Q96SL1 478 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms