RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
CXCL12-208ENST00000496375 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
CXCL12-208ENST00000496375 TRIM75PA6NK02 468 aa17.63■□□□□ 0.41
CXCL12-208ENST00000496375 CCDC158Q5M9N0 1113 aa17.63■□□□□ 0.41
CXCL12-208ENST00000496375 RAET1EQ8TD07 263 aa17.63■□□□□ 0.41
CXCL12-208ENST00000496375 ZBTB40Q9NUA8 1239 aa17.63■□□□□ 0.41
CXCL12-208ENST00000496375 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
CXCL12-208ENST00000496375 MGAMO43451 1857 aa17.63■□□□□ 0.41
CXCL12-208ENST00000496375 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
CXCL12-208ENST00000496375 FCGRTP55899 365 aa17.62■□□□□ 0.41
CXCL12-208ENST00000496375 NAA16Q6N069 864 aaPredicted RBP17.62■□□□□ 0.41
CXCL12-208ENST00000496375 SH3RF3Q8TEJ3 882 aaPredicted RBP17.62■□□□□ 0.41
CXCL12-208ENST00000496375 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
CXCL12-208ENST00000496375 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
CXCL12-208ENST00000496375 MYPNQ86TC9 1320 aa17.62■□□□□ 0.41
CXCL12-208ENST00000496375 ATAD5Q96QE3 1844 aa17.61■□□□□ 0.41
CXCL12-208ENST00000496375 MYO5AQ9Y4I1 1855 aaKnown RBP17.61■□□□□ 0.41
CXCL12-208ENST00000496375 BAG3O95817 575 aa17.6■□□□□ 0.41
CXCL12-208ENST00000496375 CYP2E1P05181 493 aaPredicted RBP17.6■□□□□ 0.41
CXCL12-208ENST00000496375 GRK4P32298 578 aa17.6■□□□□ 0.41
CXCL12-208ENST00000496375 PRKCZQ05513 592 aa17.6■□□□□ 0.41
CXCL12-208ENST00000496375 MTFR1Q15390 333 aa17.6■□□□□ 0.41
CXCL12-208ENST00000496375 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
CXCL12-208ENST00000496375 AGTPBP1Q9UPW5 1226 aa17.6■□□□□ 0.41
CXCL12-208ENST00000496375 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
CXCL12-208ENST00000496375 ZAP70P43403 619 aa17.59■□□□□ 0.41
CXCL12-208ENST00000496375 TREML2Q5T2D2 321 aa17.59■□□□□ 0.41
CXCL12-208ENST00000496375 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
CXCL12-208ENST00000496375 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
CXCL12-208ENST00000496375 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
CXCL12-208ENST00000496375 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
CXCL12-208ENST00000496375 GABRQQ9UN88 632 aa17.59■□□□□ 0.41
CXCL12-208ENST00000496375 SIPA1L1O43166 1804 aa17.58■□□□□ 0.41
CXCL12-208ENST00000496375 PLCG2P16885 1265 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 CAP2P40123 477 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 PPP4CP60510 307 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 SPP2Q13103 211 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 RRP1BQ14684 758 aaKnown RBP17.58■□□□□ 0.4
CXCL12-208ENST00000496375 ADGRA1Q86SQ6 560 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 ZNF280CQ8ND82 737 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 TGFBRAP1Q8WUH2 860 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 ZNF512BQ96KM6 892 aaPredicted RBP17.58■□□□□ 0.4
CXCL12-208ENST00000496375 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
CXCL12-208ENST00000496375 TLR7Q9NYK1 1049 aaKnown RBP17.58■□□□□ 0.4
CXCL12-208ENST00000496375 PI4KBQ9UBF8 816 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.4
CXCL12-208ENST00000496375 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.4
CXCL12-208ENST00000496375 FOCADQ5VW36 1801 aa17.57■□□□□ 0.4
CXCL12-208ENST00000496375 MAPKAPK5Q8IW41 473 aa17.57■□□□□ 0.4
CXCL12-208ENST00000496375 PROCA1Q8NCQ7 364 aaPredicted RBP17.57■□□□□ 0.4
CXCL12-208ENST00000496375 EAF2Q96CJ1 260 aaPredicted RBP17.57■□□□□ 0.4
CXCL12-208ENST00000496375 TBC1D2Q9BYX2 928 aa17.57■□□□□ 0.4
CXCL12-208ENST00000496375 DHX36Q9H2U1 1008 aaKnown RBP17.57■□□□□ 0.4
CXCL12-208ENST00000496375 PIH1D3Q9NQM4 214 aaKnown RBP17.57■□□□□ 0.4
CXCL12-208ENST00000496375 BIN2Q9UBW5 565 aaPredicted RBP17.57■□□□□ 0.4
CXCL12-208ENST00000496375 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
CXCL12-208ENST00000496375 LOC285556D6RIA3 1793 aa17.57■□□□□ 0.4
CXCL12-208ENST00000496375 FLT1P17948 1338 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 USP17L5A8MUK1 530 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 HMGCS2P54868 508 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 UBXN2AP68543 259 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
CXCL12-208ENST00000496375 ANKRD13CQ8N6S4 541 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 SHISA4Q96DD7 197 aa17.56■□□□□ 0.4
CXCL12-208ENST00000496375 TNPO2O14787 897 aaKnown RBP17.55■□□□□ 0.4
CXCL12-208ENST00000496375 IGSF3O75054 1194 aa17.55■□□□□ 0.4
CXCL12-208ENST00000496375 CCL5P13501 91 aa17.55■□□□□ 0.4
CXCL12-208ENST00000496375 FLT3LGP49771 235 aa17.55■□□□□ 0.4
CXCL12-208ENST00000496375 AS3MTQ9HBK9 375 aa17.55■□□□□ 0.4
CXCL12-208ENST00000496375 ADCY3O60266 1144 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 CYP7A1P22680 504 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.4
CXCL12-208ENST00000496375 NKX2-3Q8TAU0 364 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 TRIM34Q9BYJ4 488 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 RNF208Q9H0X6 261 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 DNAJC18Q9H819 358 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 PALD1Q9ULE6 856 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 DOCK3Q8IZD9 2030 aa17.54■□□□□ 0.4
CXCL12-208ENST00000496375 IDH1O75874 414 aaKnown RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 GJB1P08034 283 aa17.53■□□□□ 0.4
CXCL12-208ENST00000496375 GJA8P48165 433 aa17.53■□□□□ 0.4
CXCL12-208ENST00000496375 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 FAM110CQ1W6H9 321 aa17.53■□□□□ 0.4
CXCL12-208ENST00000496375 SH3D19Q5HYK7 790 aa17.53■□□□□ 0.4
CXCL12-208ENST00000496375 HABP4Q5JVS0 413 aaKnown RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 METTL16Q86W50 562 aaKnown RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
CXCL12-208ENST00000496375 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
CXCL12-208ENST00000496375 NDUFB9Q9Y6M9 179 aa17.53■□□□□ 0.4
CXCL12-208ENST00000496375 ASNSP08243 561 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 ELNP15502 786 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 JAG1P78504 1218 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 IRF5Q13568 498 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 MTMR2Q13614 643 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 ERC1Q8IUD2 1116 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 COA7Q96BR5 231 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms