RNA–Protein interactions for RNA: ENST00000495354.1

ARF4-208, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 495 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-208ENST00000495354 LOC285556D6RIA3 1793 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 IGSF3O75054 1194 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 PLCG2P16885 1265 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 ARID4AP29374 1257 aaPredicted RBP14.98□□□□□ -0.01
ARF4-208ENST00000495354 ANKRD13CQ8N6S4 541 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 NSUN4Q96CB9 384 aaKnown RBP14.98□□□□□ -0.01
ARF4-208ENST00000495354 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
ARF4-208ENST00000495354 RAI14Q9P0K7 980 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 HMG20BQ9P0W2 317 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 RBM27Q9P2N5 1060 aaKnown RBP14.98□□□□□ -0.01
ARF4-208ENST00000495354 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
ARF4-208ENST00000495354 USP17L5A8MUK1 530 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 EVI5O60447 810 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 BAG3O95817 575 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 TFRCP02786 760 aaKnown RBP14.97□□□□□ -0.01
ARF4-208ENST00000495354 GNAI2P04899 355 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 ELNP15502 786 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 CAP2P40123 477 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
ARF4-208ENST00000495354 G3BP1Q13283 466 aaKnown RBP eCLIP14.97□□□□□ -0.01
ARF4-208ENST00000495354 TEX11Q8IYF3 940 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 PAK6Q9NQU5 681 aaPredicted RBP14.97□□□□□ -0.01
ARF4-208ENST00000495354 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 MAST2Q6P0Q8 1798 aa14.97□□□□□ -0.01
ARF4-208ENST00000495354 ZBTB7BO15156 539 aaPredicted RBP14.96□□□□□ -0.01
ARF4-208ENST00000495354 HMGCRP04035 888 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 SPP2Q13103 211 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 TREML2Q5T2D2 321 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 DEFB118Q96PH6 123 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 TRIM34Q9BYJ4 488 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 GINM1Q9NU53 330 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 PI4KBQ9UBF8 816 aa14.96□□□□□ -0.01
ARF4-208ENST00000495354 ATAD5Q96QE3 1844 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 ASNSP08243 561 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 HMGCS2P54868 508 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 IRX3P78415 501 aaPredicted RBP14.95□□□□□ -0.02
ARF4-208ENST00000495354 SH3D19Q5HYK7 790 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 NECAB2Q7Z6G3 386 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.95□□□□□ -0.028e-6■■□□□ 13.3
ARF4-208ENST00000495354 TMOD4Q9NZQ9 345 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 TRIOBPQ9H2D6 2365 aa14.95□□□□□ -0.02
ARF4-208ENST00000495354 CCDC158Q5M9N0 1113 aa14.94□□□□□ -0.02
ARF4-208ENST00000495354 ATF7IPQ6VMQ6 1270 aa14.94□□□□□ -0.02
ARF4-208ENST00000495354 CCDC84Q86UT8 332 aaPredicted RBP14.94□□□□□ -0.02
ARF4-208ENST00000495354 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
ARF4-208ENST00000495354 SOCS4Q8WXH5 440 aa14.94□□□□□ -0.02
ARF4-208ENST00000495354 CRISPLD2Q9H0B8 497 aa14.94□□□□□ -0.02
ARF4-208ENST00000495354 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.94□□□□□ -0.02
ARF4-208ENST00000495354 CEP290O15078 2479 aa14.94□□□□□ -0.02
ARF4-208ENST00000495354 FAM196BA6NMK8 535 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 MCAMP43121 646 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 TTC39AQ5SRH9 613 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 NAA16Q6N069 864 aaPredicted RBP14.93□□□□□ -0.02
ARF4-208ENST00000495354 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 ASCC2Q9H1I8 757 aaPredicted RBP14.93□□□□□ -0.02
ARF4-208ENST00000495354 PRO3102Q9H379 93 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 HMX1Q9NP08 348 aaPredicted RBP14.93□□□□□ -0.02
ARF4-208ENST00000495354 GPR108Q9NPR9 543 aa14.93□□□□□ -0.02
ARF4-208ENST00000495354 RPTORQ8N122 1335 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 C19orf81C9J6K1 198 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 SLURP2P0DP57 97 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 TRIM27P14373 513 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 BACE1P56817 501 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 OS9Q13438 667 aaPredicted RBP14.92□□□□□ -0.02
ARF4-208ENST00000495354 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 PI16Q6UXB8 463 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 TBC1D9Q6ZT07 1266 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
ARF4-208ENST00000495354 CRACR2BQ8N4Y2 399 aaPredicted RBP14.92□□□□□ -0.02
ARF4-208ENST00000495354 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 MORF4L1Q9UBU8 362 aa14.92□□□□□ -0.02
ARF4-208ENST00000495354 HOXA7P31268 230 aaPredicted RBP14.91□□□□□ -0.02
ARF4-208ENST00000495354 MTMR2Q13614 643 aa14.91□□□□□ -0.02
ARF4-208ENST00000495354 FOXP4Q8IVH2 680 aaPredicted RBP14.91□□□□□ -0.02
ARF4-208ENST00000495354 CCAR1Q8IX12 1150 aaKnown RBP14.91□□□□□ -0.02
ARF4-208ENST00000495354 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
ARF4-208ENST00000495354 NUDT12Q9BQG2 462 aa14.91□□□□□ -0.02
ARF4-208ENST00000495354 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
ARF4-208ENST00000495354 FLT1P17948 1338 aa14.91□□□□□ -0.02
ARF4-208ENST00000495354 PNMA6EA0A0J9YXQ4 647 aa14.9□□□□□ -0.02
ARF4-208ENST00000495354 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
ARF4-208ENST00000495354 MAPK4P31152 587 aa14.9□□□□□ -0.02
ARF4-208ENST00000495354 PPP4CP60510 307 aa14.9□□□□□ -0.02
ARF4-208ENST00000495354 SH3RF3Q8TEJ3 882 aaPredicted RBP14.9□□□□□ -0.02
ARF4-208ENST00000495354 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
ARF4-208ENST00000495354 NBPF3Q9H094 633 aa14.9□□□□□ -0.02
ARF4-208ENST00000495354 USP17L10C9JJH3 530 aa14.89□□□□□ -0.03
ARF4-208ENST00000495354 TNNI3KQ59H18 835 aa14.89□□□□□ -0.03
ARF4-208ENST00000495354 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
ARF4-208ENST00000495354 GPRC5AQ8NFJ5 357 aa14.89□□□□□ -0.03
ARF4-208ENST00000495354 TGFBRAP1Q8WUH2 860 aa14.89□□□□□ -0.03
ARF4-208ENST00000495354 ZNF512BQ96KM6 892 aaPredicted RBP14.89□□□□□ -0.03
ARF4-208ENST00000495354 FPGT-TNNI3KV9GXZ4 949 aa14.89□□□□□ -0.03
ARF4-208ENST00000495354 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
ARF4-208ENST00000495354 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
ARF4-208ENST00000495354 HERVK_113P62684 666 aa14.88□□□□□ -0.03
ARF4-208ENST00000495354 METTL16Q86W50 562 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms