RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 CITED4Q96RK1 184 aa3.76□□□□□ -1.81
CDC42EP3-205ENST00000494083 ROCK1Q13464 1354 aa3.76□□□□□ -1.81
CDC42EP3-205ENST00000494083 POLA1P09884 1462 aaPredicted RBP3.76□□□□□ -1.81
CDC42EP3-205ENST00000494083 CYP11A1P05108 521 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 DNAJC25Q9H1X3 360 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 NLRP2Q9NX02 1062 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 AKAP2Q9Y2D5 859 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 SUPT16HQ9Y5B9 1047 aaKnown RBP3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 PHLDB1Q86UU1 1377 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 ARAP3Q8WWN8 1544 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 ADGRB1O14514 1584 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 MAGI1Q96QZ7 1491 aaPredicted RBP3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 ZNF862O60290 1169 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 AOC2O75106 756 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 HCLS1P14317 486 aaPredicted RBP3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 USP11P51784 963 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 ENOX2Q16206 610 aaKnown RBP3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 NFXL1Q6ZNB6 911 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 PDZD3Q86UT5 571 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 TBC1D32Q96NH3 1257 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 MROH2AA6NES4 1674 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 RALGAPBQ86X10 1494 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 SCAPERQ9BY12 1400 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 TPTE2Q6XPS3 522 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 OAS3Q9Y6K5 1087 aaKnown RBP3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 CDC42BPGQ6DT37 1551 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 MIA2Q96PC5 1412 aa3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 DHX29Q7Z478 1369 aaKnown RBP3.75□□□□□ -1.81
CDC42EP3-205ENST00000494083 P4HBP07237 508 aaKnown RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 CDK5R2Q13319 367 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 PRKAG2Q9UGJ0 569 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 PCDHGC5Q9Y5F6 944 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 EPRSP07814 1512 aaKnown RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 FAM135AQ9P2D6 1515 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 FGD6Q6ZV73 1430 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 LRPPRCP42704 1394 aaKnown RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 ENC1O14682 589 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 SPINK2P20155 84 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 MAP1SQ66K74 1059 aaPredicted RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 GRIN3AQ8TCU5 1115 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 ACSS3Q9H6R3 686 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 RAD18Q9NS91 495 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 NRXN1Q9ULB1 1477 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 MAP3K4Q9Y6R4 1608 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 KIAA1324LA8MWY0 1029 aaPredicted RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 TMPRSS2O15393 492 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 FMR1Q06787 632 aaKnown RBP eCLIP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 MSMPQ1L6U9 139 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 UBE3DQ7Z6J8 389 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 KCNB2Q92953 911 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 PSMG3-AS1Q96PY0 264 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 HIF3AQ9Y2N7 669 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 CDK13Q14004 1512 aaKnown RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 MARF1Q9Y4F3 1742 aaKnown RBP3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 PREX1Q8TCU6 1659 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 CCNB3Q8WWL7 1395 aa3.74□□□□□ -1.81
CDC42EP3-205ENST00000494083 ASPAP45381 313 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 C1GALT1Q9NS00 363 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 BLMP54132 1417 aaPredicted RBP3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 CELA3AP09093 270 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 GSTP1P09211 210 aaKnown RBP3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 ZCCHC11Q5TAX3 1644 aaKnown RBP3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 SAMD9LQ8IVG5 1584 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 ZNF518AQ6AHZ1 1483 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 GSC2O15499 205 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 TTLL4Q14679 1199 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 ZAR1Q86SH2 424 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 FAM181AQ8N9Y4 354 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 EZH1Q92800 747 aaPredicted RBP3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 CSADQ9Y600 493 aa3.73□□□□□ -1.81
CDC42EP3-205ENST00000494083 COBLO75128 1261 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 NEFMP07197 916 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 AEBP1Q8IUX7 1158 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 SULF2Q8IWU5 870 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 ASB16Q96NS5 453 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 FANCD2OSQ96PS1 177 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 SETD5Q9C0A6 1442 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 LRRC4CQ9HCJ2 640 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 DISC1Q9NRI5 854 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 TMEM39AQ9NV64 488 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 PIM2Q9P1W9 311 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 KIF27Q86VH2 1401 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 GP2P55259 537 aaKnown RBP3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 SEZ6L2Q6UXD5 910 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 NALCNQ8IZF0 1738 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 SETBP1Q9Y6X0 1596 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 NEFLP07196 543 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 CD96P40200 585 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 PLCB3Q01970 1234 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 PTPN12Q05209 780 aaKnown RBP3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 FAM161BQ96MY7 647 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 CRIM1Q9NZV1 1036 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 TRAK1Q9UPV9 953 aa3.72□□□□□ -1.81
CDC42EP3-205ENST00000494083 CCER2I3L3R5 266 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 NTF4P34130 210 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 PTPN11Q06124 597 aaPredicted RBP3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 DIEXFQ68CQ4 756 aaKnown RBP3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms