RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 A0A1W2PPZ6 126 aa7.19□□□□□ -1.26
CLIP4-212ENST00000493551 EHHADHQ08426 723 aa7.19□□□□□ -1.26
CLIP4-212ENST00000493551 KCNMB1Q16558 191 aa7.19□□□□□ -1.26
CLIP4-212ENST00000493551 ZNF423Q2M1K9 1284 aa7.19□□□□□ -1.26
CLIP4-212ENST00000493551 LCNL1Q6ZST4 164 aa7.19□□□□□ -1.26
CLIP4-212ENST00000493551 C9orf84Q5VXU9 1444 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 ATP10AO60312 1499 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 AOC2O75106 756 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 CDK5R2Q13319 367 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 AFAP1Q8N556 730 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 TRIM56Q9BRZ2 755 aaKnown RBP7.18□□□□□ -1.26
CLIP4-212ENST00000493551 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 RAPGEFL1Q9UHV5 662 aa7.18□□□□□ -1.26
CLIP4-212ENST00000493551 FOXD3Q9UJU5 478 aaPredicted RBP7.18□□□□□ -1.26
CLIP4-212ENST00000493551 TMEM265A0A087WTH1 108 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 ZNF503-AS2A6NEH8 195 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 ECEL1O95672 775 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 CEACAM5P06731 702 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 EIF1AXP47813 144 aaKnown RBP7.17□□□□□ -1.26
CLIP4-212ENST00000493551 ARHGAP27Q6ZUM4 889 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 ANKLE2Q86XL3 938 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 WDR18Q9BV38 432 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 SLAIN2Q9P270 581 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 POLIQ9UNA4 740 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 U3KQE9 123 aa7.17□□□□□ -1.26
CLIP4-212ENST00000493551 ZNF335Q9H4Z2 1342 aaPredicted RBP7.17□□□□□ -1.26
CLIP4-212ENST00000493551 ATG7O95352 703 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 ZSCAN22P10073 491 aaPredicted RBP7.16□□□□□ -1.26
CLIP4-212ENST00000493551 PDE3AQ14432 1141 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 ALKBH2Q6NS38 261 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 CCNJLQ8IV13 435 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 LMCD1Q9NZU5 365 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 PPP1R9AQ9ULJ8 1098 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 LTBP4Q8N2S1 1624 aa7.16□□□□□ -1.26
CLIP4-212ENST00000493551 ATP2B4P23634 1241 aa7.15□□□□□ -1.26
CLIP4-212ENST00000493551 MPSTP25325 297 aa7.15□□□□□ -1.26
CLIP4-212ENST00000493551 USP5P45974 858 aa7.15□□□□□ -1.26
CLIP4-212ENST00000493551 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
CLIP4-212ENST00000493551 PIDD1Q9HB75 910 aa7.15□□□□□ -1.26
CLIP4-212ENST00000493551 MAGI2Q86UL8 1455 aa7.15□□□□□ -1.27
CLIP4-212ENST00000493551 ARHGAP5Q13017 1502 aa7.15□□□□□ -1.27
CLIP4-212ENST00000493551 KIF14Q15058 1648 aa7.15□□□□□ -1.27
CLIP4-212ENST00000493551 C3P01024 1663 aa7.15□□□□□ -1.27
CLIP4-212ENST00000493551 SLC24A1O60721 1099 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 PLCH2O75038 1416 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 B3GALT4O96024 378 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 GRIA4P48058 902 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 OXCT1P55809 520 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 EFCAB2Q5VUJ9 269 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 TTLL10Q6ZVT0 673 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 ATXN3LQ9H3M9 355 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 DIP2CQ9Y2E4 1556 aa7.14□□□□□ -1.27
CLIP4-212ENST00000493551 CAMSAP1Q5T5Y3 1602 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 ABCA6Q8N139 1617 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 PTPRTO14522 1441 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 TMPRSS2O15393 492 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 HSPA1LP34931 641 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 BUD31P41223 144 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-212ENST00000493551 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 ZFYVE28Q9HCC9 887 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 MYO5CQ9NQX4 1742 aa7.13□□□□□ -1.27
CLIP4-212ENST00000493551 NCOA1Q15788 1441 aa7.12□□□□□ -1.27
CLIP4-212ENST00000493551 SRPK2P78362 688 aaKnown RBP7.12□□□□□ -1.27
CLIP4-212ENST00000493551 SYDE1Q6ZW31 735 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-212ENST00000493551 SMYD4Q8IYR2 804 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-212ENST00000493551 LIN37Q96GY3 246 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-212ENST00000493551 TCF12Q99081 682 aa7.12□□□□□ -1.27
CLIP4-212ENST00000493551 LIN7BQ9HAP6 207 aa7.12□□□□□ -1.27
CLIP4-212ENST00000493551 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-212ENST00000493551 PLAGL2Q9UPG8 496 aa7.12□□□□□ -1.27
CLIP4-212ENST00000493551 SNX11Q9Y5W9 270 aa7.12□□□□□ -1.27
CLIP4-212ENST00000493551 MED1Q15648 1581 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-212ENST00000493551 TRAPPC8Q9Y2L5 1435 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.11□□□□□ -1.27
CLIP4-212ENST00000493551 A0A1W2PP55 124 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.11□□□□□ -1.27
CLIP4-212ENST00000493551 AP3B2Q13367 1082 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 DUSP23Q9BVJ7 150 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 TNKS2Q9H2K2 1166 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 PRDM7Q9NQW5 492 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 ZNF518AQ6AHZ1 1483 aa7.11□□□□□ -1.27
CLIP4-212ENST00000493551 LEFTY1O75610 366 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 POLR3DP05423 398 aaPredicted RBP7.1□□□□□ -1.27
CLIP4-212ENST00000493551 AFMP43652 599 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 ID3Q02535 119 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 AAMPQ13685 434 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 ECM1Q16610 540 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 ASB11Q8WXH4 323 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 ZNF576Q9H609 170 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 CTNND2Q9UQB3 1225 aa7.1□□□□□ -1.27
CLIP4-212ENST00000493551 NFIBO00712 420 aa7.09□□□□□ -1.27
CLIP4-212ENST00000493551 SLFN14P0C7P3 912 aa7.09□□□□□ -1.27
CLIP4-212ENST00000493551 ITIH2P19823 946 aa7.09□□□□□ -1.27
CLIP4-212ENST00000493551 HNRNPUQ00839 825 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLIP4-212ENST00000493551 GALNT12Q8IXK2 581 aa7.09□□□□□ -1.27
CLIP4-212ENST00000493551 KDM5CP41229 1560 aa7.08□□□□□ -1.28
CLIP4-212ENST00000493551 GLI1P08151 1106 aa7.08□□□□□ -1.28
CLIP4-212ENST00000493551 ZP2Q05996 745 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms