RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 COL22A1Q8NFW1 1626 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 CLRN2A0PK11 232 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 SMC2O95347 1197 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 ZNF827Q17R98 1081 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 KIF4BQ2VIQ3 1234 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 CALML4Q96GE6 196 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 PCMTD1Q96MG8 357 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 ALG1Q9BT22 464 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 ANGEL1Q9UNK9 670 aaKnown RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 PLCH1Q4KWH8 1693 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 DDAH1O94760 285 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 HSP90AA2PQ14568 343 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 RSBN1LQ6PCB5 846 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 GADL1Q6ZQY3 521 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 AGBL3Q8NEM8 1001 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 SMCR8Q8TEV9 937 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 ZSCAN10Q96SZ4 725 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 SCAND2PQ9GZW5 306 aaPredicted RBP7.23□□□□□ -1.25
NF1-215ENST00000493220 TCP11L1Q9NUJ3 509 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 NWD2Q9ULI1 1742 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 PNPLA7Q6ZV29 1317 aa7.23□□□□□ -1.25
NF1-215ENST00000493220 CCNA1P78396 465 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 TFAP4Q01664 338 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 BRDTQ58F21 947 aaPredicted RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 CCDC82Q8N4S0 544 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 USP17L21D6R901 530 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 KIF20AO95235 890 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 TOP1P11387 765 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 AMPD3Q01432 767 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 ICA1Q05084 483 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 SCLT1Q96NL6 688 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 ABT1Q9ULW3 272 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 HMGB1P1B2RPK0 211 aaPredicted RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 TRIM21P19474 475 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 SETQ01105 290 aaPredicted RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 CEBPZQ03701 1054 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 LLPHQ9BRT6 129 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 TLR7Q9NYK1 1049 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 DEXIO95424 95 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 SRGNP10124 158 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 TNPO1Q92973 898 aaKnown RBP7.22□□□□□ -1.25
NF1-215ENST00000493220 GPCPD1Q9NPB8 672 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 PNMA3Q9UL41 463 aa7.22□□□□□ -1.25
NF1-215ENST00000493220 STXBP4Q6ZWJ1 553 aa7.21□□□□□ -1.25
NF1-215ENST00000493220 MCF2L2Q86YR7 1114 aa7.21□□□□□ -1.25
NF1-215ENST00000493220 GPR101Q96P66 508 aaPredicted RBP7.21□□□□□ -1.25
NF1-215ENST00000493220 LRP6O75581 1613 aa7.21□□□□□ -1.25
NF1-215ENST00000493220 SMIM5Q71RC9 77 aa7.21□□□□□ -1.25
NF1-215ENST00000493220 FIBPO43427 364 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 HSPD1P10809 573 aaKnown RBP7.21□□□□□ -1.26
NF1-215ENST00000493220 MCAMP43121 646 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 SNX21Q969T3 373 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 AKT1S1Q96B36 256 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 CAMKK2Q96RR4 588 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 CLIP2Q9UDT6 1046 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 M0R2C6 588 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 FAM84BQ96KN1 310 aaPredicted RBP7.21□□□□□ -1.26
NF1-215ENST00000493220 CEP89Q96ST8 783 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 TM6SF1Q9BZW5 370 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 KANSL2Q9H9L4 492 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 PIH1D3Q9NQM4 214 aaKnown RBP7.21□□□□□ -1.26
NF1-215ENST00000493220 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.26
NF1-215ENST00000493220 E7EWF7 191 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 TTLL1O95922 423 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 MATR3P43243 847 aaKnown RBP eCLIP7.21□□□□□ -1.26
NF1-215ENST00000493220 APOBRQ0VD83 1088 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 NDUFB9Q9Y6M9 179 aa7.21□□□□□ -1.26
NF1-215ENST00000493220 TBC1D10BQ4KMP7 808 aaPredicted RBP7.2□□□□□ -1.26
NF1-215ENST00000493220 HHIPL2Q6UWX4 724 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 MICALL2Q8IY33 904 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 SDR42E1Q8WUS8 393 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 TBC1D2Q9BYX2 928 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 ZHX3Q9H4I2 956 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 SERPINB13Q9UIV8 391 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 SNX14Q9Y5W7 946 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 LRRC37A3O60309 1634 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 SSBP05455 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
NF1-215ENST00000493220 ATG9AQ7Z3C6 839 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 MRPL11Q9Y3B7 192 aaKnown RBP7.2□□□□□ -1.26
NF1-215ENST00000493220 DKC1O60832 514 aaKnown RBP eCLIP7.2□□□□□ -1.26
NF1-215ENST00000493220 HSPA4P34932 840 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 HDLBPQ00341 1268 aaKnown RBP7.2□□□□□ -1.26
NF1-215ENST00000493220 ASPRV1Q53RT3 343 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 UPF1Q92900 1129 aaKnown RBP eCLIP7.2□□□□□ -1.26
NF1-215ENST00000493220 ZKSCAN3Q9BRR0 538 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 SAMM50Q9Y512 469 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 A0A0D9SFI3 127 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 STX6O43752 255 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 FILIP1LQ4L180 1135 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 KANK3Q6NY19 840 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 TMX3Q96JJ7 454 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 LRRC2Q9BYS8 371 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 GPBP1L1Q9HC44 474 aaPredicted RBP7.2□□□□□ -1.26
NF1-215ENST00000493220 SERPINA10Q9UK55 444 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 STRCP1A6NGW2 1772 aa7.2□□□□□ -1.26
NF1-215ENST00000493220 hCG_1984214I3L0E3 225 aa7.19□□□□□ -1.26
NF1-215ENST00000493220 ADCY7P51828 1080 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms