RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 ATF7IPQ6VMQ6 1270 aa27.76■■■□□ 2.03
HMG20B-214ENST00000493191 ANKRD13CQ8N6S4 541 aa27.76■■■□□ 2.03
HMG20B-214ENST00000493191 CCER2I3L3R5 266 aa27.75■■■□□ 2.03
HMG20B-214ENST00000493191 UBE2Q1Q7Z7E8 422 aa27.75■■■□□ 2.03
HMG20B-214ENST00000493191 OSBPL5Q9H0X9 879 aaPredicted RBP27.75■■■□□ 2.03
HMG20B-214ENST00000493191 LRP2BPQ9P2M1 347 aa27.75■■■□□ 2.03
HMG20B-214ENST00000493191 MAP4K4O95819 1239 aaPredicted RBP27.74■■■□□ 2.03
HMG20B-214ENST00000493191 SPP2Q13103 211 aa27.74■■■□□ 2.03
HMG20B-214ENST00000493191 U2AF1L4Q8WU68 220 aaKnown RBP27.74■■■□□ 2.03
HMG20B-214ENST00000493191 RRP1BQ14684 758 aaKnown RBP27.73■■■□□ 2.03
HMG20B-214ENST00000493191 CHRDL2Q6WN34 429 aa27.73■■■□□ 2.03
HMG20B-214ENST00000493191 TEX11Q8IYF3 940 aa27.73■■■□□ 2.03
HMG20B-214ENST00000493191 TAOK2Q9UL54 1235 aa27.73■■■□□ 2.03
HMG20B-214ENST00000493191 INHAP05111 366 aa27.72■■■□□ 2.03
HMG20B-214ENST00000493191 UQCRFS1P1P0C7P4 283 aa27.72■■■□□ 2.03
HMG20B-214ENST00000493191 PROCA1Q8NCQ7 364 aaPredicted RBP27.72■■■□□ 2.03
HMG20B-214ENST00000493191 ZNF280CQ8ND82 737 aa27.72■■■□□ 2.03
HMG20B-214ENST00000493191 SH3RF3Q8TEJ3 882 aaPredicted RBP27.72■■■□□ 2.03
HMG20B-214ENST00000493191 SNRKQ9NRH2 765 aa27.72■■■□□ 2.03
HMG20B-214ENST00000493191 PNMA3Q9UL41 463 aa27.72■■■□□ 2.03
HMG20B-214ENST00000493191 SGPL1O95470 568 aa27.71■■■□□ 2.03
HMG20B-214ENST00000493191 HMGCS2P54868 508 aa27.71■■■□□ 2.03
HMG20B-214ENST00000493191 PXYLP1Q8TE99 480 aa27.71■■■□□ 2.03
HMG20B-214ENST00000493191 HTATIP2Q9BUP3 242 aa27.71■■■□□ 2.03
HMG20B-214ENST00000493191 ATAD5Q96QE3 1844 aa27.71■■■□□ 2.03
HMG20B-214ENST00000493191 COL2A1P02458 1487 aaPredicted RBP27.7■■■□□ 2.03
HMG20B-214ENST00000493191 FARP2O94887 1054 aaPredicted RBP27.7■■■□□ 2.02
HMG20B-214ENST00000493191 CAP2P40123 477 aa27.7■■■□□ 2.02
HMG20B-214ENST00000493191 IRF5Q13568 498 aa27.7■■■□□ 2.02
HMG20B-214ENST00000493191 COA7Q96BR5 231 aa27.7■■■□□ 2.02
HMG20B-214ENST00000493191 NOL10Q9BSC4 688 aaKnown RBP27.7■■■□□ 2.02
HMG20B-214ENST00000493191 RANBP2P49792 3224 aaKnown RBP27.69■■■□□ 2.02
HMG20B-214ENST00000493191 FAM110CQ1W6H9 321 aa27.69■■■□□ 2.02
HMG20B-214ENST00000493191 AATFQ9NY61 560 aaKnown RBP eCLIP27.69■■■□□ 2.02
HMG20B-214ENST00000493191 TTC39AQ5SRH9 613 aa27.68■■■□□ 2.02
HMG20B-214ENST00000493191 TMEM57Q8N5G2 664 aa27.68■■■□□ 2.02
HMG20B-214ENST00000493191 DEFB118Q96PH6 123 aa27.68■■■□□ 2.02
HMG20B-214ENST00000493191 USP17L5A8MUK1 530 aa27.67■■■□□ 2.02
HMG20B-214ENST00000493191 TFRCP02786 760 aaKnown RBP27.67■■■□□ 2.02
HMG20B-214ENST00000493191 NAA16Q6N069 864 aaPredicted RBP27.67■■■□□ 2.02
HMG20B-214ENST00000493191 DBNDD2Q9BQY9 259 aa27.67■■■□□ 2.02
HMG20B-214ENST00000493191 TBC1D2Q9BYX2 928 aa27.67■■■□□ 2.02
HMG20B-214ENST00000493191 RBM27Q9P2N5 1060 aaKnown RBP27.67■■■□□ 2.02
HMG20B-214ENST00000493191 PI4KBQ9UBF8 816 aa27.67■■■□□ 2.02
HMG20B-214ENST00000493191 HERC5Q9UII4 1024 aaKnown RBP27.67■■■□□ 2.02
HMG20B-214ENST00000493191 SZT2Q5T011 3432 aa27.67■■■□□ 2.02
HMG20B-214ENST00000493191 LOC285556D6RIA3 1793 aa27.66■■■□□ 2.02
HMG20B-214ENST00000493191 OS9Q13438 667 aaPredicted RBP27.66■■■□□ 2.02
HMG20B-214ENST00000493191 TNNI3KQ59H18 835 aa27.66■■■□□ 2.02
HMG20B-214ENST00000493191 ASCC2Q9H1I8 757 aaPredicted RBP27.66■■■□□ 2.02
HMG20B-214ENST00000493191 FPGT-TNNI3KV9GXZ4 949 aa27.66■■■□□ 2.02
HMG20B-214ENST00000493191 BAG3O95817 575 aa27.65■■■□□ 2.02
HMG20B-214ENST00000493191 GCLCP48506 637 aaPredicted RBP27.65■■■□□ 2.02
HMG20B-214ENST00000493191 PABPC4Q13310 644 aaKnown RBP eCLIP27.65■■■□□ 2.02
HMG20B-214ENST00000493191 POLA2Q14181 598 aa27.65■■■□□ 2.02
HMG20B-214ENST00000493191 CCDC158Q5M9N0 1113 aa27.65■■■□□ 2.02
HMG20B-214ENST00000493191 TGFBRAP1Q8WUH2 860 aa27.65■■■□□ 2.02
HMG20B-214ENST00000493191 ZKSCAN2Q63HK3 967 aa27.64■■■□□ 2.02
HMG20B-214ENST00000493191 ADGRA1Q86SQ6 560 aa27.64■■■□□ 2.02
HMG20B-214ENST00000493191 MAPKAPK5Q8IW41 473 aa27.64■■■□□ 2.02
HMG20B-214ENST00000493191 DHX36Q9H2U1 1008 aaKnown RBP27.64■■■□□ 2.02
HMG20B-214ENST00000493191 AS3MTQ9HBK9 375 aa27.64■■■□□ 2.02
HMG20B-214ENST00000493191 GPR108Q9NPR9 543 aa27.64■■■□□ 2.02
HMG20B-214ENST00000493191 PAK6Q9NQU5 681 aaPredicted RBP27.64■■■□□ 2.02
HMG20B-214ENST00000493191 NR2E3Q9Y5X4 410 aa27.64■■■□□ 2.02
HMG20B-214ENST00000493191 SIPA1L1O43166 1804 aa27.63■■■□□ 2.01
HMG20B-214ENST00000493191 CYP2E1P05181 493 aaPredicted RBP27.63■■■□□ 2.01
HMG20B-214ENST00000493191 PLCG2P16885 1265 aa27.63■■■□□ 2.01
HMG20B-214ENST00000493191 ATP8B2P98198 1209 aa27.63■■■□□ 2.01
HMG20B-214ENST00000493191 SH3D19Q5HYK7 790 aa27.63■■■□□ 2.01
HMG20B-214ENST00000493191 MYO5AQ9Y4I1 1855 aaKnown RBP27.63■■■□□ 2.01
HMG20B-214ENST00000493191 SURF6O75683 361 aaKnown RBP27.62■■■□□ 2.01
HMG20B-214ENST00000493191 PPP4CP60510 307 aa27.62■■■□□ 2.01
HMG20B-214ENST00000493191 JAG1P78504 1218 aa27.62■■■□□ 2.01
HMG20B-214ENST00000493191 MTMR2Q13614 643 aa27.62■■■□□ 2.01
HMG20B-214ENST00000493191 SSH3Q8TE77 659 aa27.62■■■□□ 2.01
HMG20B-214ENST00000493191 C1orf115Q9H7X2 142 aa27.62■■■□□ 2.01
HMG20B-214ENST00000493191 CDK5RAP2Q96SN8 1893 aa27.61■■■□□ 2.01
HMG20B-214ENST00000493191 ZBTB7BO15156 539 aaPredicted RBP27.61■■■□□ 2.01
HMG20B-214ENST00000493191 WDR18Q9BV38 432 aa27.61■■■□□ 2.01
HMG20B-214ENST00000493191 DNAJC18Q9H819 358 aa27.61■■■□□ 2.01
HMG20B-214ENST00000493191 PALD1Q9ULE6 856 aa27.61■■■□□ 2.01
HMG20B-214ENST00000493191 FLT1P17948 1338 aa27.61■■■□□ 2.01
HMG20B-214ENST00000493191 ASNSP08243 561 aa27.6■■■□□ 2.01
HMG20B-214ENST00000493191 SHROOM1Q2M3G4 852 aaPredicted RBP27.6■■■□□ 2.01
HMG20B-214ENST00000493191 CRACR2BQ8N4Y2 399 aaPredicted RBP27.6■■■□□ 2.01
HMG20B-214ENST00000493191 CRISPLD2Q9H0B8 497 aa27.6■■■□□ 2.01
HMG20B-214ENST00000493191 GJD2Q9UKL4 321 aa27.6■■■□□ 2.01
HMG20B-214ENST00000493191 MAST2Q6P0Q8 1798 aa27.6■■■□□ 2.01
HMG20B-214ENST00000493191 EVI5O60447 810 aa27.59■■■□□ 2.01
HMG20B-214ENST00000493191 ZAP70P43403 619 aa27.59■■■□□ 2.01
HMG20B-214ENST00000493191 BACE1P56817 501 aa27.59■■■□□ 2.01
HMG20B-214ENST00000493191 FOXP4Q8IVH2 680 aaPredicted RBP27.59■■■□□ 2.01
HMG20B-214ENST00000493191 TRIM34Q9BYJ4 488 aa27.59■■■□□ 2.01
HMG20B-214ENST00000493191 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.59■■■□□ 2.01
HMG20B-214ENST00000493191 PIH1D3Q9NQM4 214 aaKnown RBP27.59■■■□□ 2.01
HMG20B-214ENST00000493191 TMOD4Q9NZQ9 345 aa27.59■■■□□ 2.01
HMG20B-214ENST00000493191 SAP30BPQ9UHR5 308 aaKnown RBP27.59■■■□□ 2.01
HMG20B-214ENST00000493191 PEX10O60683 326 aa27.58■■■□□ 2.01
HMG20B-214ENST00000493191 GDF11O95390 407 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms