RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 TNFRSF10AO00220 468 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 LARGE1O95461 756 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 EVCP57679 992 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 SCARF1Q14162 830 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 Q6ZUG5 572 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 GNL3LQ9NVN8 582 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
SRGAP3-210ENST00000491467 PFKFB2O60825 505 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 EGFRP00533 1210 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 GNAT2P19087 354 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 GTF2E1P29083 439 aaPredicted RBP14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 PHKA1P46020 1223 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 HMGN5P82970 282 aaKnown RBP14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 FGD1P98174 961 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 SLC9C2Q5TAH2 1124 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 LARP1BQ659C4 914 aaKnown RBP14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 GZF1Q9H116 711 aaPredicted RBP14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 VPS33BQ9H267 617 aa14.05□□□□□ -0.16
SRGAP3-210ENST00000491467 SEMA3EO15041 775 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 GPAA1O43292 621 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 FGAP02671 866 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 CHRNDQ07001 517 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 NCOA7Q8NI08 942 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 NLRP3Q96P20 1036 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 SEC31BQ9NQW1 1179 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 GGA3Q9NZ52 723 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 MTMR6Q9Y217 621 aa14.04□□□□□ -0.16
SRGAP3-210ENST00000491467 ZNF213O14771 459 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 LETM1O95202 739 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 MCM5P33992 734 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 ST3GAL1Q11201 340 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 TTLL12Q14166 644 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 STOX1Q6ZVD7 989 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 RPGRQ92834 1020 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 ANKRD2Q9GZV1 360 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 PUS7LQ9H0K6 701 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 PTCH2Q9Y6C5 1203 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 TAF6LQ9Y6J9 622 aa14.03□□□□□ -0.16
SRGAP3-210ENST00000491467 PDS5AQ29RF7 1337 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 TCRBV5S4A2TA0A5A2 114 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 PATL2C9JE40 543 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 DHX16O60231 1041 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 IDH1O75874 414 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 CHGBP05060 677 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 PDE6AP16499 860 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 BCAMP50895 628 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 TRDNQ13061 729 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 CAVIN4Q5BKX8 364 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 NECAB1Q8N987 351 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 HELBQ8NG08 1087 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 SMARCC2Q8TAQ2 1214 aa14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 PIH1D3Q9NQM4 214 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-210ENST00000491467 ZNF804BA4D1E1 1349 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 ZNF532Q9HCE3 1301 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 EVI5O60447 810 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 UBE2HP62256 183 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 DPF2Q92785 391 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 BRF1Q92994 677 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 DENND2AQ9ULE3 1009 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
SRGAP3-210ENST00000491467 IRS2Q9Y4H2 1338 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
SRGAP3-210ENST00000491467 XRCC6P12956 609 aaKnown RBP eCLIP14□□□□□ -0.17
SRGAP3-210ENST00000491467 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
SRGAP3-210ENST00000491467 SP3Q02447 781 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 RASGRF1Q13972 1273 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 LRIT3Q3SXY7 679 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
SRGAP3-210ENST00000491467 ATL3Q6DD88 541 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 CAVIN1Q6NZI2 390 aaKnown RBP14□□□□□ -0.17
SRGAP3-210ENST00000491467 SH3TC2Q8TF17 1288 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
SRGAP3-210ENST00000491467 SHISA4Q96DD7 197 aa14□□□□□ -0.17
SRGAP3-210ENST00000491467 STRBPQ96SI9 672 aaKnown RBP14□□□□□ -0.17
SRGAP3-210ENST00000491467 MAST2Q6P0Q8 1798 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 ASTN2O75129 1339 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 ELP1O95163 1332 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 FOXP2O15409 715 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 KRT85P78386 507 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 KIF4BQ2VIQ3 1234 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 ZSCAN23Q3MJ62 389 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 PI16Q6UXB8 463 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 MB21D2Q8IYB1 491 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 FAM184AQ8NB25 1140 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 TMEM87BQ96K49 555 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms