RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 STAG1Q8WVM7 1258 aa25.78■■□□□ 1.72
VCPKMT-204ENST00000491402 DHX36Q9H2U1 1008 aaKnown RBP25.78■■□□□ 1.72
VCPKMT-204ENST00000491402 SH3BP5LQ7L8J4 393 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 KRT26Q7Z3Y9 468 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 TTC6Q86TZ1 520 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 FAM151AQ8WW52 585 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 GLIS2Q9BZE0 524 aaPredicted RBP25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 RBM19Q9Y4C8 960 aaKnown RBP25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 DDTLA6NHG4 134 aaPredicted RBP25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 CASTP20810 708 aaKnown RBP25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 DLK2Q6UY11 383 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 USP48Q86UV5 1035 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 ZSCAN29Q8IWY8 852 aaPredicted RBP25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 TACC3Q9Y6A5 838 aa25.77■■□□□ 1.72
VCPKMT-204ENST00000491402 NEDD4P46934 1319 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 PITPNM2Q9BZ72 1349 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 HLA-DOAP06340 250 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 SLC3A2P08195 630 aaKnown RBP25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 PSMA5P28066 241 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 TNNI2P48788 182 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 MFSD6Q6ZSS7 791 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 SULF1Q8IWU6 871 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 RBM46Q8TBY0 533 aaKnown RBP25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 NEK1Q96PY6 1258 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 TM6SF1Q9BZW5 370 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 RNF41Q9H4P4 317 aaPredicted RBP25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 INCENPQ9NQS7 918 aa25.76■■□□□ 1.71
VCPKMT-204ENST00000491402 ADM5C9JUS6 153 aa25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 COL9A3Q14050 684 aaPredicted RBP25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 RABEP1Q15276 862 aa25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 CDC37L1Q7L3B6 337 aa25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 APOBEC3FQ8IUX4 373 aaKnown RBP25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 UPF3BQ9BZI7 483 aaKnown RBP25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 TMEM39BQ9GZU3 492 aa25.75■■□□□ 1.71
VCPKMT-204ENST00000491402 PCP11498 1178 aaKnown RBP25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 SMC1BQ8NDV3 1235 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 DYNLL2Q96FJ2 89 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 MYH8P13535 1937 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 FGRP09769 529 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 TRDNQ13061 729 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 RASA3Q14644 834 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 NCOA7Q8NI08 942 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 DEFB129Q9H1M3 183 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 ZSWIM6Q9HCJ5 1215 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 PI4KBQ9UBF8 816 aa25.74■■□□□ 1.71
VCPKMT-204ENST00000491402 PDE4BQ07343 736 aa25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 PRAMEF18Q5VWM3 479 aa25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 RALYLQ86SE5 291 aaKnown RBP25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 CSRNP1Q96S65 589 aa25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 EHD4Q9H223 541 aa25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 CNNM2Q9H8M5 875 aa25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 SERPINB13Q9UIV8 391 aa25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.73■■□□□ 1.71
VCPKMT-204ENST00000491402 TRAF5O00463 557 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 ITGBL1O95965 494 aaPredicted RBP25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 CPA1P15085 419 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 GABPAQ06546 454 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 BLOC1S2Q6QNY1 142 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 C16orf86Q6ZW13 317 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 TOMM22Q9NS69 142 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 HMGB1P09429 215 aaKnown RBP25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 FMR1Q06787 632 aaKnown RBP eCLIP25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 RUFY3Q7L099 469 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 SLC44A5Q8NCS7 719 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 KRT23Q9C075 422 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 CYP46A1Q9Y6A2 500 aa25.72■■□□□ 1.71
VCPKMT-204ENST00000491402 B4E1Z4 1266 aa25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 PRDM1O75626 825 aa25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 NEK4P51957 841 aa25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 RRP12Q5JTH9 1297 aaKnown RBP25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 CDAN1Q8IWY9 1227 aa25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 MB21D2Q8IYB1 491 aaPredicted RBP25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 NKX2-3Q8TAU0 364 aa25.71■■□□□ 1.71
VCPKMT-204ENST00000491402 ORC4O43929 436 aa25.7■■□□□ 1.7
VCPKMT-204ENST00000491402 RPS6KB1P23443 525 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 CDK8P49336 464 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 TEPSINQ96N21 525 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 ZNF287Q9HBT7 754 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 KDM4AO75164 1064 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 DHX32Q7L7V1 743 aaKnown RBP25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 CRACR2BQ8N4Y2 399 aaPredicted RBP25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 DNAJC18Q9H819 358 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 MKNK2Q9HBH9 465 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 SWAP70Q9UH65 585 aa25.69■■□□□ 1.7
VCPKMT-204ENST00000491402 METTL16Q86W50 562 aaKnown RBP25.68■■□□□ 1.7
VCPKMT-204ENST00000491402 FOXP4Q8IVH2 680 aaPredicted RBP25.68■■□□□ 1.7
VCPKMT-204ENST00000491402 ESR2Q92731 530 aa25.68■■□□□ 1.7
VCPKMT-204ENST00000491402 SLURP2P0DP57 97 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 MCM5P33992 734 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 FSTL1Q12841 308 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 TCEANC2Q96MN5 208 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 ZSWIM5Q9P217 1185 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 TAOK2Q9UL54 1235 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 PPP2R3BQ9Y5P8 575 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 FAM196BA6NMK8 535 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 RANBP6O60518 1105 aaKnown RBP25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 CHST3Q7LGC8 479 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 CDCA5Q96FF9 252 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 TTC14Q96N46 770 aa25.67■■□□□ 1.7
VCPKMT-204ENST00000491402 TRIM34Q9BYJ4 488 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms