RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 POP1Q99575 1024 aaKnown RBP6.52□□□□□ -1.37
CSTF1-205ENST00000490539 DNAJC25Q9H1X3 360 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 LRPPRCP42704 1394 aaKnown RBP6.52□□□□□ -1.37
CSTF1-205ENST00000490539 ABCC11Q96J66 1382 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 CLSPNQ9HAW4 1339 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 DCCP43146 1447 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 PTCH1Q13635 1447 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 LINC01387J3KSC0 135 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 KLHL23Q8NBE8 558 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 NIF3L1Q9GZT8 377 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 MRPL18Q9H0U6 180 aaKnown RBP6.51□□□□□ -1.37
CSTF1-205ENST00000490539 CAMTA1Q9Y6Y1 1673 aa6.51□□□□□ -1.37
CSTF1-205ENST00000490539 YTHDC2Q9H6S0 1430 aaKnown RBP6.5□□□□□ -1.37
CSTF1-205ENST00000490539 EIF3AQ14152 1382 aaKnown RBP6.5□□□□□ -1.37
CSTF1-205ENST00000490539 CDC25BP30305 580 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 ASAP3Q8TDY4 903 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 BSNDQ8WZ55 320 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 WNT8BQ93098 351 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 PPP4R2Q9NY27 417 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 TRAK1Q9UPV9 953 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 PTPRUQ92729 1446 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 ADGRL3Q9HAR2 1447 aa6.5□□□□□ -1.37
CSTF1-205ENST00000490539 SHPRHQ149N8 1683 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 NRXN1Q9ULB1 1477 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 ROBO2Q9HCK4 1378 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 H3BRJ5 948 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 DEAF1O75398 565 aaPredicted RBP6.49□□□□□ -1.37
CSTF1-205ENST00000490539 SELPP16109 830 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 SAFB2Q14151 953 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSTF1-205ENST00000490539 SHISA2Q6UWI4 295 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 TXNRD3Q86VQ6 643 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 NXPE3Q969Y0 559 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
CSTF1-205ENST00000490539 PRAM1Q96QH2 718 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 SEC31BQ9NQW1 1179 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
CSTF1-205ENST00000490539 NRXN3Q9Y4C0 1643 aa6.49□□□□□ -1.37
CSTF1-205ENST00000490539 IFT172Q9UG01 1749 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 ROCK2O75116 1388 aaKnown RBP6.48□□□□□ -1.37
CSTF1-205ENST00000490539 NFKBIEO00221 500 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 DLL1O00548 723 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 EIF1AYO14602 144 aaKnown RBP6.48□□□□□ -1.37
CSTF1-205ENST00000490539 FSCN2O14926 492 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 POLR3DP05423 398 aaPredicted RBP6.48□□□□□ -1.37
CSTF1-205ENST00000490539 CD68P34810 354 aaPredicted RBP6.48□□□□□ -1.37
CSTF1-205ENST00000490539 ADGRE1Q14246 886 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 SETDB1Q15047 1291 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 TMC7Q7Z402 723 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 DDX54Q8TDD1 881 aaKnown RBP6.48□□□□□ -1.37
CSTF1-205ENST00000490539 OSGEPQ9NPF4 335 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 TECPR2O15040 1411 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 PRAG1Q86YV5 1406 aa6.48□□□□□ -1.37
CSTF1-205ENST00000490539 XRN1Q8IZH2 1706 aaKnown RBP6.47□□□□□ -1.37
CSTF1-205ENST00000490539 GPR182O15218 404 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 GADD45BO75293 160 aaPredicted RBP6.47□□□□□ -1.37
CSTF1-205ENST00000490539 TRPA1O75762 1119 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 ACPPP15309 386 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 HSPA6P17066 643 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 EPHA1P21709 976 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 ORC1Q13415 861 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 IKBKEQ14164 716 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 MBTPS1Q14703 1052 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 TXNDC11Q6PKC3 985 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 SLC7A3Q8WY07 619 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 LRRC59Q96AG4 307 aaKnown RBP6.47□□□□□ -1.37
CSTF1-205ENST00000490539 CSRNP1Q96S65 589 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 CARD11Q9BXL7 1154 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 BHLHE41Q9C0J9 482 aaPredicted RBP6.47□□□□□ -1.37
CSTF1-205ENST00000490539 EHD4Q9H223 541 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 AKTIPQ9H8T0 292 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 LIN7BQ9HAP6 207 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 NPHP3Q7Z494 1330 aa6.47□□□□□ -1.37
CSTF1-205ENST00000490539 CHD4Q14839 1912 aa6.46□□□□□ -1.37
CSTF1-205ENST00000490539 NINLQ9Y2I6 1382 aa6.46□□□□□ -1.37
CSTF1-205ENST00000490539 KIAA0319Q5VV43 1072 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 MCTP1Q6DN14 999 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 BRINP3Q76B58 766 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 TMEM130Q8N3G9 435 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 CCDC74AQ96AQ1 378 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 LATS2Q9NRM7 1088 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.46□□□□□ -1.38
CSTF1-205ENST00000490539 SOX13Q9UN79 622 aa6.46□□□□□ -1.38
CSTF1-205ENST00000490539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.46□□□□□ -1.38
CSTF1-205ENST00000490539 A0A1W2PP55 124 aa6.45□□□□□ -1.38
CSTF1-205ENST00000490539 C19orf57Q0VDD7 668 aa6.45□□□□□ -1.38
CSTF1-205ENST00000490539 R3HDM1Q15032 1099 aaKnown RBP6.45□□□□□ -1.38
CSTF1-205ENST00000490539 DUOXA2Q1HG44 320 aa6.45□□□□□ -1.38
CSTF1-205ENST00000490539 PEAR1Q5VY43 1037 aaPredicted RBP6.45□□□□□ -1.38
CSTF1-205ENST00000490539 WFDC12Q8WWY7 111 aa6.45□□□□□ -1.38
CSTF1-205ENST00000490539 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
CSTF1-205ENST00000490539 HHIPQ96QV1 700 aa6.45□□□□□ -1.38
CSTF1-205ENST00000490539 HIRIP3Q9BW71 556 aaPredicted RBP6.45□□□□□ -1.38
CSTF1-205ENST00000490539 CARD10Q9BWT7 1032 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms