RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
PLOD3-216ENST00000489927 COL2A1P02458 1487 aaPredicted RBP19.56■□□□□ 0.72
PLOD3-216ENST00000489927 IPO8O15397 1037 aaKnown RBP19.56■□□□□ 0.72
PLOD3-216ENST00000489927 INHAP05111 366 aa19.56■□□□□ 0.72
PLOD3-216ENST00000489927 SPP2Q13103 211 aa19.56■□□□□ 0.72
PLOD3-216ENST00000489927 IRF5Q13568 498 aa19.56■□□□□ 0.72
PLOD3-216ENST00000489927 RRP1BQ14684 758 aaKnown RBP19.56■□□□□ 0.72
PLOD3-216ENST00000489927 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
PLOD3-216ENST00000489927 PXYLP1Q8TE99 480 aa19.56■□□□□ 0.72
PLOD3-216ENST00000489927 FRAT1Q92837 279 aaPredicted RBP19.56■□□□□ 0.72
PLOD3-216ENST00000489927 HTATIP2Q9BUP3 242 aa19.56■□□□□ 0.72
PLOD3-216ENST00000489927 BCAR3O75815 825 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 FARP2O94887 1054 aaPredicted RBP19.55■□□□□ 0.72
PLOD3-216ENST00000489927 SGPL1O95470 568 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 G3BP1Q13283 466 aaKnown RBP eCLIP19.55■□□□□ 0.72
PLOD3-216ENST00000489927 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 ZNF280CQ8ND82 737 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 CLUAP1Q96AJ1 413 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 LRP2BPQ9P2M1 347 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
PLOD3-216ENST00000489927 CAP2P40123 477 aa19.54■□□□□ 0.72
PLOD3-216ENST00000489927 FAM110CQ1W6H9 321 aa19.54■□□□□ 0.72
PLOD3-216ENST00000489927 TEX11Q8IYF3 940 aa19.54■□□□□ 0.72
PLOD3-216ENST00000489927 SH3RF3Q8TEJ3 882 aaPredicted RBP19.54■□□□□ 0.72
PLOD3-216ENST00000489927 RBM27Q9P2N5 1060 aaKnown RBP19.54■□□□□ 0.72
PLOD3-216ENST00000489927 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
PLOD3-216ENST00000489927 CCER2I3L3R5 266 aa19.53■□□□□ 0.72
PLOD3-216ENST00000489927 UQCRFS1P1P0C7P4 283 aa19.53■□□□□ 0.72
PLOD3-216ENST00000489927 HMGCS2P54868 508 aa19.53■□□□□ 0.72
PLOD3-216ENST00000489927 COA7Q96BR5 231 aa19.53■□□□□ 0.72
PLOD3-216ENST00000489927 DEFB118Q96PH6 123 aa19.53■□□□□ 0.72
PLOD3-216ENST00000489927 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.72
PLOD3-216ENST00000489927 TBC1D2Q9BYX2 928 aa19.52■□□□□ 0.72
PLOD3-216ENST00000489927 PAK6Q9NQU5 681 aaPredicted RBP19.52■□□□□ 0.72
PLOD3-216ENST00000489927 SNRKQ9NRH2 765 aa19.52■□□□□ 0.72
PLOD3-216ENST00000489927 AATFQ9NY61 560 aaKnown RBP eCLIP19.52■□□□□ 0.72
PLOD3-216ENST00000489927 HERC5Q9UII4 1024 aaKnown RBP19.52■□□□□ 0.72
PLOD3-216ENST00000489927 TRIOBPQ9H2D6 2365 aa19.51■□□□□ 0.71
PLOD3-216ENST00000489927 USP17L5A8MUK1 530 aa19.51■□□□□ 0.71
PLOD3-216ENST00000489927 TFRCP02786 760 aaKnown RBP19.51■□□□□ 0.71
PLOD3-216ENST00000489927 GCLCP48506 637 aaPredicted RBP19.51■□□□□ 0.71
PLOD3-216ENST00000489927 PABPC4Q13310 644 aaKnown RBP eCLIP19.51■□□□□ 0.71
PLOD3-216ENST00000489927 NOL10Q9BSC4 688 aaKnown RBP19.51■□□□□ 0.71
PLOD3-216ENST00000489927 ASCC2Q9H1I8 757 aaPredicted RBP19.51■□□□□ 0.71
PLOD3-216ENST00000489927 PI4KBQ9UBF8 816 aa19.51■□□□□ 0.71
PLOD3-216ENST00000489927 ATAD5Q96QE3 1844 aa19.51■□□□□ 0.71
PLOD3-216ENST00000489927 SH3D19Q5HYK7 790 aa19.5■□□□□ 0.71
PLOD3-216ENST00000489927 TTC39AQ5SRH9 613 aa19.5■□□□□ 0.71
PLOD3-216ENST00000489927 NAA16Q6N069 864 aaPredicted RBP19.5■□□□□ 0.71
PLOD3-216ENST00000489927 TMEM57Q8N5G2 664 aa19.5■□□□□ 0.71
PLOD3-216ENST00000489927 DHX36Q9H2U1 1008 aaKnown RBP19.5■□□□□ 0.71
PLOD3-216ENST00000489927 NR2E3Q9Y5X4 410 aa19.5■□□□□ 0.71
PLOD3-216ENST00000489927 BAG3O95817 575 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 POLA2Q14181 598 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 TNNI3KQ59H18 835 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 DBNDD2Q9BQY9 259 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 CRISPLD2Q9H0B8 497 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 PRO3102Q9H379 93 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 AS3MTQ9HBK9 375 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 GPR108Q9NPR9 543 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 FPGT-TNNI3KV9GXZ4 949 aa19.49■□□□□ 0.71
PLOD3-216ENST00000489927 SIPA1L1O43166 1804 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 MAST2Q6P0Q8 1798 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 ZBTB7BO15156 539 aaPredicted RBP19.48■□□□□ 0.71
PLOD3-216ENST00000489927 CYP2E1P05181 493 aaPredicted RBP19.48■□□□□ 0.71
PLOD3-216ENST00000489927 PPP4CP60510 307 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 JAG1P78504 1218 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 MTMR2Q13614 643 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 CCDC158Q5M9N0 1113 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 TGFBRAP1Q8WUH2 860 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 WDR18Q9BV38 432 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 DNAJC18Q9H819 358 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 FLT1P17948 1338 aa19.48■□□□□ 0.71
PLOD3-216ENST00000489927 EVI5O60447 810 aa19.47■□□□□ 0.71
PLOD3-216ENST00000489927 PLCG2P16885 1265 aa19.47■□□□□ 0.71
PLOD3-216ENST00000489927 CAPN2P17655 700 aa19.47■□□□□ 0.71
PLOD3-216ENST00000489927 OS9Q13438 667 aaPredicted RBP19.47■□□□□ 0.71
PLOD3-216ENST00000489927 SSH3Q8TE77 659 aa19.47■□□□□ 0.71
PLOD3-216ENST00000489927 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.47■□□□□ 0.71
PLOD3-216ENST00000489927 GJD2Q9UKL4 321 aa19.47■□□□□ 0.71
PLOD3-216ENST00000489927 HMGCRP04035 888 aa19.46■□□□□ 0.71
PLOD3-216ENST00000489927 ASNSP08243 561 aa19.46■□□□□ 0.71
PLOD3-216ENST00000489927 BACE1P56817 501 aa19.46■□□□□ 0.71
PLOD3-216ENST00000489927 SHROOM1Q2M3G4 852 aaPredicted RBP19.46■□□□□ 0.71
PLOD3-216ENST00000489927 ZKSCAN2Q63HK3 967 aa19.46■□□□□ 0.71
PLOD3-216ENST00000489927 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
PLOD3-216ENST00000489927 PAWRQ96IZ0 340 aaKnown RBP19.46■□□□□ 0.71
PLOD3-216ENST00000489927 MORF4L1Q9UBU8 362 aa19.46■□□□□ 0.71
PLOD3-216ENST00000489927 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
PLOD3-216ENST00000489927 SURF6O75683 361 aaKnown RBP19.45■□□□□ 0.7
PLOD3-216ENST00000489927 ZAP70P43403 619 aa19.45■□□□□ 0.7
PLOD3-216ENST00000489927 ATP8B2P98198 1209 aa19.45■□□□□ 0.7
PLOD3-216ENST00000489927 TRIM32Q13049 653 aa19.45■□□□□ 0.7
PLOD3-216ENST00000489927 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
PLOD3-216ENST00000489927 CRACR2BQ8N4Y2 399 aaPredicted RBP19.45■□□□□ 0.7
PLOD3-216ENST00000489927 ZNF512BQ96KM6 892 aaPredicted RBP19.45■□□□□ 0.7
PLOD3-216ENST00000489927 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
PLOD3-216ENST00000489927 DOCK3Q8IZD9 2030 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms