RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 UVSSAQ2YD98 709 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 ZSCAN25Q6NSZ9 544 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 SRLQ86TD4 932 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 FAM184AQ8NB25 1140 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
NOD1-208ENST00000489614 FAM53CQ9NYF3 392 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.37□□□□□ -0.59
NOD1-208ENST00000489614 HIBADHP31937 336 aaKnown RBP11.36□□□□□ -0.59
NOD1-208ENST00000489614 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
NOD1-208ENST00000489614 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 ADCK5Q3MIX3 580 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 MUM1L1Q5H9M0 696 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 CCDC91Q7Z6B0 441 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 STRBPQ96SI9 672 aaKnown RBP11.36□□□□□ -0.59
NOD1-208ENST00000489614 AGXT2Q9BYV1 514 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 PAXBP1Q9Y5B6 917 aa11.36□□□□□ -0.59
NOD1-208ENST00000489614 BIRC2Q13490 618 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 CUL4AQ13619 759 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 LRRFIP1Q32MZ4 808 aaKnown RBP11.35□□□□□ -0.59
NOD1-208ENST00000489614 CEP135Q66GS9 1140 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 CREBRFQ8IUR6 639 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
NOD1-208ENST00000489614 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
NOD1-208ENST00000489614 PLCD4Q9BRC7 762 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
NOD1-208ENST00000489614 CYP21A2P08686 494 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 PTGER2P43116 358 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 CAVIN4Q5BKX8 364 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 GORABQ5T7V8 394 aa11.35□□□□□ -0.59
NOD1-208ENST00000489614 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.35□□□□□ -0.59
NOD1-208ENST00000489614 CWC15Q9P013 229 aaKnown RBP11.35□□□□□ -0.59
NOD1-208ENST00000489614 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 EPB41L4AQ9HCS5 686 aaPredicted RBP11.34□□□□□ -0.59
NOD1-208ENST00000489614 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 MAP2K2P36507 400 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
NOD1-208ENST00000489614 LRCH2Q5VUJ6 765 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 NOL8Q76FK4 1167 aaKnown RBP11.34□□□□□ -0.59
NOD1-208ENST00000489614 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 GPAA1O43292 621 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 MCCP23508 829 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 ERCC6LQ2NKX8 1250 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
NOD1-208ENST00000489614 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
NOD1-208ENST00000489614 TACC3Q9Y6A5 838 aa11.34□□□□□ -0.59
NOD1-208ENST00000489614 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 LMAN1P49257 510 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 EXOSC10Q01780 885 aaKnown RBP11.33□□□□□ -0.6
NOD1-208ENST00000489614 GPS2Q13227 327 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
NOD1-208ENST00000489614 SLC9C2Q5TAH2 1124 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 PRPF40BQ6NWY9 871 aaKnown RBP11.33□□□□□ -0.6
NOD1-208ENST00000489614 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 PNMA6AP0CW24 399 aaPredicted RBP11.33□□□□□ -0.6
NOD1-208ENST00000489614 ST3GAL1Q11201 340 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
NOD1-208ENST00000489614 GAKO14976 1311 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
NOD1-208ENST00000489614 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 GSG1L2A8MUP6 293 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 FGRP09769 529 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 GRIK5Q16478 980 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 RUFY3Q7L099 469 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 RPAINQ86UA6 219 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 CWC22Q9HCG8 908 aaKnown RBP11.32□□□□□ -0.6
NOD1-208ENST00000489614 NID2Q14112 1375 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 ROBO3Q96MS0 1386 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 H0YIN7 160 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 UFL1O94874 794 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 ZNF804AQ7Z570 1209 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
NOD1-208ENST00000489614 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 CHRNA5P30532 468 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 EVCP57679 992 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 TGFB2P61812 414 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 CEP120Q8N960 986 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
NOD1-208ENST00000489614 TRMT1Q9NXH9 659 aaKnown RBP11.32□□□□□ -0.6
NOD1-208ENST00000489614 UTRNP46939 3433 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 MYH6P13533 1939 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 MCM2P49736 904 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 CLCN6P51797 869 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 TPM4P67936 248 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 MECOMQ03112 1051 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms