RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 PRO3102Q9H379 93 aa12.45□□□□□ -0.42
CSF3R-213ENST00000489551 AGTPBP1Q9UPW5 1226 aa12.45□□□□□ -0.42
CSF3R-213ENST00000489551 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
CSF3R-213ENST00000489551 SGPL1O95470 568 aa12.44□□□□□ -0.42
CSF3R-213ENST00000489551 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
CSF3R-213ENST00000489551 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
CSF3R-213ENST00000489551 SLF2Q8IX21 1173 aa12.44□□□□□ -0.42
CSF3R-213ENST00000489551 ANKRD13CQ8N6S4 541 aa12.44□□□□□ -0.42
CSF3R-213ENST00000489551 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
CSF3R-213ENST00000489551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSF3R-213ENST00000489551 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
CSF3R-213ENST00000489551 BIN2Q9UBW5 565 aaPredicted RBP12.44□□□□□ -0.42
CSF3R-213ENST00000489551 COL6A3P12111 3177 aa12.44□□□□□ -0.42
CSF3R-213ENST00000489551 PEX10O60683 326 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 INHAP05111 366 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 CAP2P40123 477 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 UBXN2AP68543 259 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 SPP2Q13103 211 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 NKX2-3Q8TAU0 364 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
CSF3R-213ENST00000489551 DPF3Q92784 378 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 SNRKQ9NRH2 765 aa12.43□□□□□ -0.42
CSF3R-213ENST00000489551 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
CSF3R-213ENST00000489551 GNAI2P04899 355 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 HMGCS2P54868 508 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 IRF5Q13568 498 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 POLA2Q14181 598 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 ATF7IPQ6VMQ6 1270 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 PROCA1Q8NCQ7 364 aaPredicted RBP12.42□□□□□ -0.42
CSF3R-213ENST00000489551 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
CSF3R-213ENST00000489551 PAK6Q9NQU5 681 aaPredicted RBP12.42□□□□□ -0.42
CSF3R-213ENST00000489551 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 GJD2Q9UKL4 321 aa12.42□□□□□ -0.42
CSF3R-213ENST00000489551 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
CSF3R-213ENST00000489551 CCER2I3L3R5 266 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 ZBTB7BO15156 539 aaPredicted RBP12.41□□□□□ -0.42
CSF3R-213ENST00000489551 FARP2O94887 1054 aaPredicted RBP12.41□□□□□ -0.42
CSF3R-213ENST00000489551 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
CSF3R-213ENST00000489551 LDHCP07864 332 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 TRIM32Q13049 653 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 FAM110CQ1W6H9 321 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 SH3D19Q5HYK7 790 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 FRAT1Q92837 279 aaPredicted RBP12.41□□□□□ -0.42
CSF3R-213ENST00000489551 DEFB118Q96PH6 123 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 ASCC2Q9H1I8 757 aaPredicted RBP12.41□□□□□ -0.42
CSF3R-213ENST00000489551 AATFQ9NY61 560 aaKnown RBP eCLIP12.41□□□□□ -0.42
CSF3R-213ENST00000489551 FRMPD3Q5JV73 1810 aa12.41□□□□□ -0.42
CSF3R-213ENST00000489551 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
CSF3R-213ENST00000489551 GSTO1P78417 241 aa12.4□□□□□ -0.42
CSF3R-213ENST00000489551 G3BP1Q13283 466 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSF3R-213ENST00000489551 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
CSF3R-213ENST00000489551 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
CSF3R-213ENST00000489551 METTL16Q86W50 562 aaKnown RBP12.4□□□□□ -0.42
CSF3R-213ENST00000489551 DIS3LQ8TF46 1054 aaKnown RBP12.4□□□□□ -0.42
CSF3R-213ENST00000489551 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
CSF3R-213ENST00000489551 DNAH12Q6ZR08 3092 aa12.4□□□□□ -0.42
CSF3R-213ENST00000489551 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
CSF3R-213ENST00000489551 PPP4CP60510 307 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 MAPKAPK5Q8IW41 473 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 HTATIP2Q9BUP3 242 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 C1orf115Q9H7X2 142 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 TXNRD2Q9NNW7 524 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 PIH1D3Q9NQM4 214 aaKnown RBP12.39□□□□□ -0.43
CSF3R-213ENST00000489551 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
CSF3R-213ENST00000489551 LRP2BPQ9P2M1 347 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
CSF3R-213ENST00000489551 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
CSF3R-213ENST00000489551 FLT1P17948 1338 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 IPO8O15397 1037 aaKnown RBP12.38□□□□□ -0.43
CSF3R-213ENST00000489551 TFRCP02786 760 aaKnown RBP12.38□□□□□ -0.43
CSF3R-213ENST00000489551 UQCRFS1P1P0C7P4 283 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 ZAP70P43403 619 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 DYNLL1P63167 89 aaKnown RBP12.38□□□□□ -0.43
CSF3R-213ENST00000489551 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 COA7Q96BR5 231 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 PAWRQ96IZ0 340 aaKnown RBP12.38□□□□□ -0.43
CSF3R-213ENST00000489551 P2RX7Q99572 595 aaKnown RBP12.38□□□□□ -0.43
CSF3R-213ENST00000489551 WDR18Q9BV38 432 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 MORF4L1Q9UBU8 362 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 PALD1Q9ULE6 856 aa12.38□□□□□ -0.43
CSF3R-213ENST00000489551 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
CSF3R-213ENST00000489551 GDF11O95390 407 aa12.37□□□□□ -0.43
CSF3R-213ENST00000489551 RLBP1P12271 317 aa12.37□□□□□ -0.43
CSF3R-213ENST00000489551 HOXA7P31268 230 aaPredicted RBP12.37□□□□□ -0.43
CSF3R-213ENST00000489551 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms