RNA–Protein interactions for RNA: ENST00000489295.5

LRRFIP1-213, Transcript of LRR binding FLII interacting protein 1, human

TSL 5

Gene LRRFIP1, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-213	ENST00000489295	CLRN2	A0PK11	232 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	SLC27A2	O14975	620 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	PC	P11498	1178 aa	Known RBP	12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	NFIA	Q12857	509 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	PICALM	Q13492	652 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	KRT32	Q14532	448 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	TSGA10IP	Q3SY00	556 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	RBM26	Q5T8P6	1007 aa	Known RBP	12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	CREB3L3	Q68CJ9	461 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	FAM151A	Q8WW52	585 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	DDX4	Q9NQI0	724 aa	Known RBP	12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	FAM198A	Q9UFP1	575 aa		12.86	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	CNTNAP1	P78357	1384 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	ZNF213	O14771	459 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	HLA-DOA	P06340	250 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	SLC3A2	P08195	630 aa	Known RBP	12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	CYP21A2	P08686	494 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	PPARA	Q07869	468 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	C12orf60	Q5U649	245 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	CTR9	Q6PD62	1173 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	TTC6	Q86TZ1	520 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	INTS4	Q96HW7	963 aa	Known RBP	12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	EHD4	Q9H223	541 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	RNF41	Q9H4P4	317 aa	Predicted RBP	12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	VEZT	Q9HBM0	779 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	GGA3	Q9NZ52	723 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	MYH1	P12882	1939 aa		12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.85	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	UTRN	P46939	3433 aa		12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	POTEC	B2RU33	542 aa		12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	USP17L12	C9JPN9	530 aa		12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	USP17L21	D6R901	530 aa		12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	POLR3D	P05423	398 aa	Predicted RBP	12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	VEGFA	P15692	232 aa	Predicted RBP	12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	HIRA	P54198	1017 aa	Predicted RBP	12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	CACNB3	P54284	484 aa		12.84	□□□□□ -0.35
LRRFIP1-213	ENST00000489295	TCP10L2	B9ZVM9	353 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ANGEL2	Q5VTE6	544 aa	Known RBP	12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	STAG1	Q8WVM7	1258 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	HOOK2	Q96ED9	719 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	CNNM2	Q9H8M5	875 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ZNF287	Q9HBT7	754 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	PGAP2	Q9UHJ9	254 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SAP30BP	Q9UHR5	308 aa	Known RBP	12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SNX14	Q9Y5W7	946 aa		12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	DDX49	Q9Y6V7	483 aa	Known RBP	12.83	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	MINDY4B	A8MYZ0	360 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ORC4	O43929	436 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TCP10	Q12799	353 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	CUL4A	Q13619	759 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	RASA3	Q14644	834 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	AKNAD1	Q5T1N1	836 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TBC1D10C	Q8IV04	446 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	DCPS	Q96C86	337 aa	Known RBP	12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TM6SF1	Q9BZW5	370 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	NBPF3	Q9H094	633 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	PI4KB	Q9UBF8	816 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SWAP70	Q9UH65	585 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	PALD1	Q9ULE6	856 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SIPA1L1	O43166	1804 aa		12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ASTN2	O75129	1339 aa	Predicted RBP	12.82	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	HMGB1	P09429	215 aa	Known RBP	12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	FGR	P09769	529 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	CYP2D6	P10635	497 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	PSMA5	P28066	241 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	NEK4	P51957	841 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ZNF445	P59923	1031 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	HAND2	P61296	217 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	GABPA	Q06546	454 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	PDE4B	Q07343	736 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TRDN	Q13061	729 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	C16orf86	Q6ZW13	317 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SH3BP5L	Q7L8J4	393 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	METTL16	Q86W50	562 aa	Known RBP	12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	LDHD	Q86WU2	507 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SULF1	Q8IWU6	871 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	RASEF	Q8IZ41	740 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ANP32B	Q92688	251 aa	Known RBP	12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	CSRNP1	Q96S65	589 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	DEFB129	Q9H1M3	183 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	HERC5	Q9UII4	1024 aa	Known RBP	12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	SERPINB13	Q9UIV8	391 aa		12.81	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	CYP2D7	A0A087X1C5	515 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	DDTL	A6NHG4	134 aa	Predicted RBP	12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295		E7EWF7	191 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TBC1D12	O60347	775 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	MBD3	O95983	291 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	PLCD1	P51178	756 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	CCDC173	Q0VFZ6	552 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	EAPP	Q56P03	285 aa	Predicted RBP	12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	MFSD6	Q6ZSS7	791 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	RALYL	Q86SE5	291 aa	Known RBP	12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	ZFPM1	Q8IX07	1006 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TMX3	Q96JJ7	454 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TEPSIN	Q96N21	525 aa		12.8	□□□□□ -0.36
LRRFIP1-213	ENST00000489295	TRIM34	Q9BYJ4	488 aa		12.8	□□□□□ -0.36

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