RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.223e-9■■■■□ 19.3
RPL13A-212ENST00000488946 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
RPL13A-212ENST00000488946 CRY2Q49AN0 593 aa16.45■□□□□ 0.22
RPL13A-212ENST00000488946 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
RPL13A-212ENST00000488946 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
RPL13A-212ENST00000488946 STK36Q9NRP7 1315 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 CCDC66A2RUB6 948 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 PPFIA3O75145 1194 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 RCAN1P53805 252 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 C15orf52Q6ZUT6 534 aaKnown RBP16.44■□□□□ 0.22
RPL13A-212ENST00000488946 SDR42E1Q8WUS8 393 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 FEZ1Q99689 392 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 KCNF1Q9H3M0 494 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 TULP2O00295 520 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
RPL13A-212ENST00000488946 NPHP1O15259 732 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 CDC27P30260 824 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 NTRK3Q16288 839 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 RBM43Q6ZSC3 357 aaKnown RBP16.44■□□□□ 0.22
RPL13A-212ENST00000488946 TIGD1Q96MW7 591 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 USP28Q96RU2 1077 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
RPL13A-212ENST00000488946 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
RPL13A-212ENST00000488946 LTBP1Q14766 1721 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 TPM3P06753 285 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 MECOMQ03112 1051 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
RPL13A-212ENST00000488946 BRAPQ7Z569 592 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 XDHP47989 1333 aa16.43■□□□□ 0.22
RPL13A-212ENST00000488946 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 MMP14P50281 582 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 DYNLL1P63167 89 aaKnown RBP16.42■□□□□ 0.22
RPL13A-212ENST00000488946 ANKRD7Q92527 254 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 CLSTN2Q9H4D0 955 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 OGFRQ9NZT2 677 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 PYCARDQ9ULZ3 195 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 FGRP09769 529 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 SLFN14P0C7P3 912 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
RPL13A-212ENST00000488946 CAPN2P17655 700 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
RPL13A-212ENST00000488946 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 RTEL1Q9NZ71 1219 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
RPL13A-212ENST00000488946 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
RPL13A-212ENST00000488946 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.221e-12■■□□□ 11.7
RPL13A-212ENST00000488946 CCDC69A6NI79 296 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
RPL13A-212ENST00000488946 CCDC192P0DO97 292 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 ST5P78524 1137 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 WTAPQ15007 396 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
RPL13A-212ENST00000488946 RXRAP19793 462 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 RRP12Q5JTH9 1297 aaKnown RBP16.4■□□□□ 0.22
RPL13A-212ENST00000488946 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 MYH2Q9UKX2 1941 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 SERPINB2P05120 415 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 IFNAR1P17181 557 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 PRDX5P30044 214 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 CHAF1AQ13111 956 aaPredicted RBP16.4■□□□□ 0.22
RPL13A-212ENST00000488946 SEC23AQ15436 765 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
RPL13A-212ENST00000488946 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
RPL13A-212ENST00000488946 ESR2Q92731 530 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
RPL13A-212ENST00000488946 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 MINDY4BA8MYZ0 360 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 YEATS4O95619 227 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 SPC24Q8NBT2 197 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
RPL13A-212ENST00000488946 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
RPL13A-212ENST00000488946 ERICH2A1L162 156 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 NR1I2O75469 434 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 FMNL1O95466 1100 aaPredicted RBP16.39■□□□□ 0.21
RPL13A-212ENST00000488946 IARSP41252 1262 aaKnown RBP16.39■□□□□ 0.21
RPL13A-212ENST00000488946 DDR1Q08345 913 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 CTR9Q6PD62 1173 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 SYNE3Q6ZMZ3 975 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
RPL13A-212ENST00000488946 TNMDQ9H2S6 317 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 TOMM22Q9NS69 142 aa16.39■□□□□ 0.21
RPL13A-212ENST00000488946 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms