RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 FAM13AO94988 1023 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 ABL1P00519 1130 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 EIF1AXP47813 144 aaKnown RBP4.83□□□□□ -1.64
PRPF4-203ENST00000488937 FANCCQ00597 558 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 FMR1Q06787 632 aaKnown RBP eCLIP4.83□□□□□ -1.64
PRPF4-203ENST00000488937 ERICH6BQ5W0A0 696 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 ALKBH2Q6NS38 261 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 XKR5Q6UX68 686 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 UBE2Q2Q8WVN8 375 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 DHX38Q92620 1227 aaKnown RBP4.83□□□□□ -1.64
PRPF4-203ENST00000488937 BRINP2Q9C0B6 783 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 PIF1Q9H611 641 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 TMEM63CQ9P1W3 806 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 MYRFQ9Y2G1 1151 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 SUGT1Q9Y2Z0 365 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 RIPOR2Q9Y4F9 1068 aa4.83□□□□□ -1.64
PRPF4-203ENST00000488937 ATP2B1P20020 1258 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 MZF1P28698 734 aaPredicted RBP4.82□□□□□ -1.64
PRPF4-203ENST00000488937 CD96P40200 585 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 AFMP43652 599 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 GSTM4Q03013 218 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 PUM1Q14671 1186 aaKnown RBP eCLIP4.82□□□□□ -1.64
PRPF4-203ENST00000488937 ANGEL2Q5VTE6 544 aaKnown RBP4.82□□□□□ -1.64
PRPF4-203ENST00000488937 DYMQ7RTS9 669 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 VN1R5Q7Z5H4 357 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 ATCAYQ86WG3 371 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 KCNB2Q92953 911 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 NXPE3Q969Y0 559 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 RBCK1Q9BYM8 510 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 IRF2BPLQ9H1B7 796 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 METTL14Q9HCE5 456 aaKnown RBP4.82□□□□□ -1.64
PRPF4-203ENST00000488937 ANO2Q9NQ90 1003 aa4.82□□□□□ -1.64
PRPF4-203ENST00000488937 LOC102724159A0A0B4J2E5 919 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 FZD6O60353 706 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 DLGAP3O95886 979 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 PDGFAP04085 211 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 CYP11A1P05108 521 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 ESRRAP11474 423 aaPredicted RBP4.81□□□□□ -1.64
PRPF4-203ENST00000488937 EDN3P14138 238 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 PWP2Q15269 919 aaKnown RBP4.81□□□□□ -1.64
PRPF4-203ENST00000488937 PTPROQ16827 1216 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 FYB2Q5VWT5 728 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 HGSNATQ68CP4 663 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 PLD6Q8N2A8 252 aaKnown RBP4.81□□□□□ -1.64
PRPF4-203ENST00000488937 DDX54Q8TDD1 881 aaKnown RBP4.81□□□□□ -1.64
PRPF4-203ENST00000488937 EDEM1Q92611 657 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 NUDT16Q96DE0 195 aaKnown RBP4.81□□□□□ -1.64
PRPF4-203ENST00000488937 HRASLS5Q96KN8 279 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 PSMD1Q99460 953 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 OSMRQ99650 979 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 MKNK2Q9HBH9 465 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 RAD18Q9NS91 495 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 SLC52A1Q9NWF4 448 aa4.81□□□□□ -1.64
PRPF4-203ENST00000488937 TREHO43280 583 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 INSRRP14616 1297 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 ASPAP45381 313 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 HNRNPUQ00839 825 aaKnown RBP eCLIP4.8□□□□□ -1.64
PRPF4-203ENST00000488937 IFI16Q16666 785 aaKnown RBP4.8□□□□□ -1.64
PRPF4-203ENST00000488937 CCDC181Q5TID7 509 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 ZNF746Q6NUN9 644 aaPredicted RBP4.8□□□□□ -1.64
PRPF4-203ENST00000488937 ARHGAP27Q6ZUM4 889 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 TMC7Q7Z402 723 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 TMC4Q7Z404 712 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 BHLHE41Q9C0J9 482 aaPredicted RBP4.8□□□□□ -1.64
PRPF4-203ENST00000488937 C1GALT1Q9NS00 363 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 CNTN3Q9P232 1028 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 AP4E1Q9UPM8 1137 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 CTNND2Q9UQB3 1225 aa4.8□□□□□ -1.64
PRPF4-203ENST00000488937 TMEM265A0A087WTH1 108 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 ETV2O00321 342 aaPredicted RBP4.79□□□□□ -1.64
PRPF4-203ENST00000488937 ACPPP15309 386 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 GTF2F1P35269 517 aaKnown RBP eCLIP4.79□□□□□ -1.64
PRPF4-203ENST00000488937 FGD1P98174 961 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 DSC3Q14574 896 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 TCEAL1Q15170 157 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 AKAP4Q5JQC9 854 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 SEZ6L2Q6UXD5 910 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 FAM9AQ8IZU1 332 aaPredicted RBP4.79□□□□□ -1.64
PRPF4-203ENST00000488937 GJD3Q8N144 294 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 C1orf127Q8N9H9 656 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 MARCH10Q8NA82 808 aaPredicted RBP4.79□□□□□ -1.64
PRPF4-203ENST00000488937 TMEM87AQ8NBN3 555 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 ASAP3Q8TDY4 903 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 RNF34Q969K3 372 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 HHIPQ96QV1 700 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 DIRC2Q96SL1 478 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 GGNBP2Q9H3C7 697 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 GSX1Q9H4S2 264 aaPredicted RBP4.79□□□□□ -1.64
PRPF4-203ENST00000488937 NSUN3Q9H649 340 aaKnown RBP4.79□□□□□ -1.64
PRPF4-203ENST00000488937 CAPN10Q9HC96 672 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 FAM105AQ9NUU6 356 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 POLIQ9UNA4 740 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 DAGLAQ9Y4D2 1042 aa4.79□□□□□ -1.64
PRPF4-203ENST00000488937 PRPF40AO75400 957 aaKnown RBP4.78□□□□□ -1.64
PRPF4-203ENST00000488937 ITGAEP38570 1179 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 USP5P45974 858 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 IGBP1P78318 339 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 DAB2P98082 770 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 DNM1Q05193 864 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms