RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ANGEL1Q9UNK9 670 aaKnown RBP12.86□□□□□ -0.35
COL21A1-211ENST00000488912 MYH8P13535 1937 aa12.86□□□□□ -0.35
COL21A1-211ENST00000488912 DTNBO60941 627 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 CACNB3P54284 484 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 EVCP57679 992 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 NFIAQ12857 509 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 GSE1Q14687 1217 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 AGBL3Q8NEM8 1001 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 GTF3C6Q969F1 213 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 ZKSCAN3Q9BRR0 538 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 CWC22Q9HCG8 908 aaKnown RBP12.85□□□□□ -0.35
COL21A1-211ENST00000488912 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
COL21A1-211ENST00000488912 ORC4O43929 436 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
COL21A1-211ENST00000488912 PDE4BQ07343 736 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
COL21A1-211ENST00000488912 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
COL21A1-211ENST00000488912 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
COL21A1-211ENST00000488912 KLF18A0A0U1RQI7 1052 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 IFIT3O14879 490 aaKnown RBP12.84□□□□□ -0.35
COL21A1-211ENST00000488912 PDIA3P30101 505 aaKnown RBP12.84□□□□□ -0.35
COL21A1-211ENST00000488912 SCRN1Q12765 414 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 OGFOD1Q8N543 542 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
COL21A1-211ENST00000488912 SIPA1L1O43166 1804 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 PFKFB2O60825 505 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 PKP1Q13835 747 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 ZNF274Q96GC6 653 aaPredicted RBP12.84□□□□□ -0.35
COL21A1-211ENST00000488912 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
COL21A1-211ENST00000488912 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
COL21A1-211ENST00000488912 HDAC9Q9UKV0 1011 aa12.84□□□□□ -0.35
COL21A1-211ENST00000488912 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 FZD9O00144 591 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 TNIP1Q15025 636 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 SMC3Q9UQE7 1217 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 LIFRP42702 1097 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 CCT2P78371 535 aaKnown RBP12.83□□□□□ -0.36
COL21A1-211ENST00000488912 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
COL21A1-211ENST00000488912 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 IDI2Q9BXS1 227 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.36
COL21A1-211ENST00000488912 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
COL21A1-211ENST00000488912 TNKSO95271 1327 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 SHTN1A0MZ66 631 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL21A1-211ENST00000488912 TCP10Q12799 353 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 DLGAP5Q15398 846 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 C16orf86Q6ZW13 317 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 SGMS1Q86VZ5 419 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
COL21A1-211ENST00000488912 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 ERICH2A1L162 156 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 LMNB1P20700 586 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 GJB2P29033 226 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
COL21A1-211ENST00000488912 WTAPQ15007 396 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 SEC23AQ15436 765 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 NFXL1Q6ZNB6 911 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
COL21A1-211ENST00000488912 ENAHQ8N8S7 591 aaPredicted RBP12.82□□□□□ -0.36
COL21A1-211ENST00000488912 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
COL21A1-211ENST00000488912 NMT2O60551 498 aa12.81□□□□□ -0.36
COL21A1-211ENST00000488912 CDK8P49336 464 aa12.81□□□□□ -0.36
COL21A1-211ENST00000488912 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
COL21A1-211ENST00000488912 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
COL21A1-211ENST00000488912 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 JAK2O60674 1132 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 RXRAP19793 462 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 RASA1P20936 1047 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 RPS12P25398 132 aaKnown RBP12.8□□□□□ -0.36
COL21A1-211ENST00000488912 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 MICU3Q86XE3 530 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 CLRN2A0PK11 232 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
COL21A1-211ENST00000488912 CTDNEP1O95476 244 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
COL21A1-211ENST00000488912 TFAP4Q01664 338 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 GABPAQ06546 454 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 ZNF287Q9HBT7 754 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 MYOZ2Q9NPC6 264 aa12.8□□□□□ -0.36
COL21A1-211ENST00000488912 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms