RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 GPR108Q9NPR9 543 aa22.65■■□□□ 1.22
HDAC6-231ENST00000488905 TNNI3KQ59H18 835 aa22.64■■□□□ 1.21
HDAC6-231ENST00000488905 GABRQQ9UN88 632 aa22.64■■□□□ 1.21
HDAC6-231ENST00000488905 FPGT-TNNI3KV9GXZ4 949 aa22.64■■□□□ 1.21
HDAC6-231ENST00000488905 TRIOBPQ9H2D6 2365 aa22.64■■□□□ 1.21
HDAC6-231ENST00000488905 MYH1P12882 1939 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 CCL5P13501 91 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 UBXN2AP68543 259 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 OS9Q13438 667 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-231ENST00000488905 TTC39AQ5SRH9 613 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 TREML2Q5T2D2 321 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 NKX2-3Q8TAU0 364 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 SSH3Q8TE77 659 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 SH3RF3Q8TEJ3 882 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-231ENST00000488905 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
HDAC6-231ENST00000488905 BIN2Q9UBW5 565 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-231ENST00000488905 PNMA3Q9UL41 463 aa22.63■■□□□ 1.21
HDAC6-231ENST00000488905 PROCA1Q8NCQ7 364 aaPredicted RBP22.62■■□□□ 1.21
HDAC6-231ENST00000488905 DBNDD2Q9BQY9 259 aa22.62■■□□□ 1.21
HDAC6-231ENST00000488905 TBC1D2Q9BYX2 928 aa22.62■■□□□ 1.21
HDAC6-231ENST00000488905 SNRKQ9NRH2 765 aa22.62■■□□□ 1.21
HDAC6-231ENST00000488905 HERC5Q9UII4 1024 aaKnown RBP22.62■■□□□ 1.21
HDAC6-231ENST00000488905 TNPO2O14787 897 aaKnown RBP22.61■■□□□ 1.21
HDAC6-231ENST00000488905 GJB1P08034 283 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 GJA8P48165 433 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 CCDC158Q5M9N0 1113 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 NAA16Q6N069 864 aaPredicted RBP22.61■■□□□ 1.21
HDAC6-231ENST00000488905 FTSJ3Q8IY81 847 aaKnown RBP22.61■■□□□ 1.21
HDAC6-231ENST00000488905 ZNF280CQ8ND82 737 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 RNF208Q9H0X6 261 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 C1orf115Q9H7X2 142 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 AATFQ9NY61 560 aaKnown RBP eCLIP22.61■■□□□ 1.21
HDAC6-231ENST00000488905 SZT2Q5T011 3432 aa22.61■■□□□ 1.21
HDAC6-231ENST00000488905 CAP2P40123 477 aa22.6■■□□□ 1.21
HDAC6-231ENST00000488905 FLT3LGP49771 235 aa22.6■■□□□ 1.21
HDAC6-231ENST00000488905 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
HDAC6-231ENST00000488905 SPP2Q13103 211 aa22.6■■□□□ 1.21
HDAC6-231ENST00000488905 FAM110CQ1W6H9 321 aa22.6■■□□□ 1.21
HDAC6-231ENST00000488905 ANKRD13CQ8N6S4 541 aa22.6■■□□□ 1.21
HDAC6-231ENST00000488905 ADCY3O60266 1144 aa22.59■■□□□ 1.21
HDAC6-231ENST00000488905 SURF6O75683 361 aaKnown RBP22.59■■□□□ 1.21
HDAC6-231ENST00000488905 BAG3O95817 575 aa22.59■■□□□ 1.21
HDAC6-231ENST00000488905 CYP2E1P05181 493 aaPredicted RBP22.59■■□□□ 1.21
HDAC6-231ENST00000488905 PLCG2P16885 1265 aa22.59■■□□□ 1.21
HDAC6-231ENST00000488905 HMGCS2P54868 508 aa22.59■■□□□ 1.21
HDAC6-231ENST00000488905 RRP1BQ14684 758 aaKnown RBP22.59■■□□□ 1.21
HDAC6-231ENST00000488905 DHX36Q9H2U1 1008 aaKnown RBP22.59■■□□□ 1.21
HDAC6-231ENST00000488905 FLT1P17948 1338 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
HDAC6-231ENST00000488905 IRF5Q13568 498 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 UBE2Q1Q7Z7E8 422 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 ADGRA1Q86SQ6 560 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 ZNF512BQ96KM6 892 aaPredicted RBP22.58■■□□□ 1.21
HDAC6-231ENST00000488905 UNC93B1Q9H1C4 597 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 PI4KBQ9UBF8 816 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 PLXNB2O15031 1838 aa22.58■■□□□ 1.21
HDAC6-231ENST00000488905 USP17L5A8MUK1 530 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 H0YGN5 161 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 INHAP05111 366 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 ELNP15502 786 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 PPP4CP60510 307 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 PABPC4Q13310 644 aaKnown RBP eCLIP22.57■■□□□ 1.2
HDAC6-231ENST00000488905 PXYLP1Q8TE99 480 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 AS3MTQ9HBK9 375 aa22.57■■□□□ 1.2
HDAC6-231ENST00000488905 DBNLQ9UJU6 430 aaKnown RBP22.57■■□□□ 1.2
HDAC6-231ENST00000488905 COLQQ9Y215 455 aaPredicted RBP22.57■■□□□ 1.2
HDAC6-231ENST00000488905 RLBP1P12271 317 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 ZAP70P43403 619 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 SH3D19Q5HYK7 790 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 MAPKAPK5Q8IW41 473 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 U2AF1L4Q8WU68 220 aaKnown RBP22.56■■□□□ 1.2
HDAC6-231ENST00000488905 TGFBRAP1Q8WUH2 860 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 COA7Q96BR5 231 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 DNAJC18Q9H819 358 aa22.56■■□□□ 1.2
HDAC6-231ENST00000488905 TLR7Q9NYK1 1049 aaKnown RBP22.56■■□□□ 1.2
HDAC6-231ENST00000488905 NOP58Q9Y2X3 529 aaKnown RBP22.56■■□□□ 1.2
HDAC6-231ENST00000488905 ALPK3Q96L96 1907 aa22.55■■□□□ 1.2
HDAC6-231ENST00000488905 DDX60LQ5H9U9 1706 aaKnown RBP22.55■■□□□ 1.2
HDAC6-231ENST00000488905 IGSF3O75054 1194 aa22.55■■□□□ 1.2
HDAC6-231ENST00000488905 GCLCP48506 637 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-231ENST00000488905 FXR1P51114 621 aaKnown RBP eCLIP22.55■■□□□ 1.2
HDAC6-231ENST00000488905 NAV1Q8NEY1 1877 aa22.54■■□□□ 1.2
HDAC6-231ENST00000488905 ASNSP08243 561 aa22.54■■□□□ 1.2
HDAC6-231ENST00000488905 MTMR2Q13614 643 aa22.54■■□□□ 1.2
HDAC6-231ENST00000488905 METTL16Q86W50 562 aaKnown RBP22.54■■□□□ 1.2
HDAC6-231ENST00000488905 ASCC2Q9H1I8 757 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-231ENST00000488905 PIH1D3Q9NQM4 214 aaKnown RBP22.54■■□□□ 1.2
HDAC6-231ENST00000488905 TAOK2Q9UL54 1235 aa22.54■■□□□ 1.2
HDAC6-231ENST00000488905 ZBTB7BO15156 539 aaPredicted RBP22.53■■□□□ 1.2
HDAC6-231ENST00000488905 FARP2O94887 1054 aaPredicted RBP22.53■■□□□ 1.2
HDAC6-231ENST00000488905 DPF3Q92784 378 aa22.53■■□□□ 1.2
HDAC6-231ENST00000488905 HTATIP2Q9BUP3 242 aa22.53■■□□□ 1.2
HDAC6-231ENST00000488905 WDR18Q9BV38 432 aa22.53■■□□□ 1.2
HDAC6-231ENST00000488905 TRIM34Q9BYJ4 488 aa22.53■■□□□ 1.2
HDAC6-231ENST00000488905 SGPL1O95470 568 aa22.52■■□□□ 1.2
HDAC6-231ENST00000488905 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
HDAC6-231ENST00000488905 EAF2Q96CJ1 260 aaPredicted RBP22.52■■□□□ 1.2
HDAC6-231ENST00000488905 CCDC8Q9H0W5 538 aaPredicted RBP22.52■■□□□ 1.2
HDAC6-231ENST00000488905 PALD1Q9ULE6 856 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms