RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 C1orf115Q9H7X2 142 aa31.88■■■□□ 2.69
RNF220-216ENST00000488865 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.88■■■□□ 2.69
RNF220-216ENST00000488865 AGTPBP1Q9UPW5 1226 aa31.88■■■□□ 2.69
RNF220-216ENST00000488865 FAM196BA6NMK8 535 aa31.87■■■□□ 2.69
RNF220-216ENST00000488865 PLCG2P16885 1265 aa31.87■■■□□ 2.69
RNF220-216ENST00000488865 ITPRIPQ8IWB1 547 aa31.87■■■□□ 2.69
RNF220-216ENST00000488865 SH3RF3Q8TEJ3 882 aaPredicted RBP31.87■■■□□ 2.69
RNF220-216ENST00000488865 HERC5Q9UII4 1024 aaKnown RBP31.87■■■□□ 2.69
RNF220-216ENST00000488865 MGAMO43451 1857 aa31.86■■■□□ 2.69
RNF220-216ENST00000488865 MAST2Q6P0Q8 1798 aa31.86■■■□□ 2.69
RNF220-216ENST00000488865 PPP4CP60510 307 aa31.86■■■□□ 2.69
RNF220-216ENST00000488865 CCDC84Q86UT8 332 aaPredicted RBP31.86■■■□□ 2.69
RNF220-216ENST00000488865 DHX36Q9H2U1 1008 aaKnown RBP31.86■■■□□ 2.69
RNF220-216ENST00000488865 CYP2E1P05181 493 aaPredicted RBP31.85■■■□□ 2.69
RNF220-216ENST00000488865 RLBP1P12271 317 aa31.85■■■□□ 2.69
RNF220-216ENST00000488865 CAP2P40123 477 aa31.85■■■□□ 2.69
RNF220-216ENST00000488865 PRKCZQ05513 592 aa31.85■■■□□ 2.69
RNF220-216ENST00000488865 MTFR1Q15390 333 aa31.85■■■□□ 2.69
RNF220-216ENST00000488865 PROCA1Q8NCQ7 364 aaPredicted RBP31.85■■■□□ 2.69
RNF220-216ENST00000488865 SMCR8Q8TEV9 937 aaPredicted RBP31.85■■■□□ 2.69
RNF220-216ENST00000488865 AATFQ9NY61 560 aaKnown RBP eCLIP31.85■■■□□ 2.69
RNF220-216ENST00000488865 PI4KBQ9UBF8 816 aa31.85■■■□□ 2.69
RNF220-216ENST00000488865 ZNF280CQ8ND82 737 aa31.84■■■□□ 2.69
RNF220-216ENST00000488865 PCDH10Q9P2E7 1040 aa31.84■■■□□ 2.69
RNF220-216ENST00000488865 SPP2Q13103 211 aa31.83■■■□□ 2.69
RNF220-216ENST00000488865 PNMA3Q9UL41 463 aa31.83■■■□□ 2.69
RNF220-216ENST00000488865 SLAIN1Q8ND83 568 aa31.82■■■□□ 2.68
RNF220-216ENST00000488865 NKX2-3Q8TAU0 364 aa31.82■■■□□ 2.68
RNF220-216ENST00000488865 DBNLQ9UJU6 430 aaKnown RBP31.82■■■□□ 2.68
RNF220-216ENST00000488865 USP17L5A8MUK1 530 aa31.81■■■□□ 2.68
RNF220-216ENST00000488865 UBXN2AP68543 259 aa31.81■■■□□ 2.68
RNF220-216ENST00000488865 RRP1BQ14684 758 aaKnown RBP31.81■■■□□ 2.68
RNF220-216ENST00000488865 TREML2Q5T2D2 321 aa31.81■■■□□ 2.68
RNF220-216ENST00000488865 GABRQQ9UN88 632 aa31.81■■■□□ 2.68
RNF220-216ENST00000488865 ATAD5Q96QE3 1844 aa31.81■■■□□ 2.68
RNF220-216ENST00000488865 ZAP70P43403 619 aa31.8■■■□□ 2.68
RNF220-216ENST00000488865 ADGRA1Q86SQ6 560 aa31.8■■■□□ 2.68
RNF220-216ENST00000488865 TGFBRAP1Q8WUH2 860 aa31.8■■■□□ 2.68
RNF220-216ENST00000488865 SHISA4Q96DD7 197 aa31.79■■■□□ 2.68
RNF220-216ENST00000488865 AS3MTQ9HBK9 375 aa31.79■■■□□ 2.68
RNF220-216ENST00000488865 BIN2Q9UBW5 565 aaPredicted RBP31.79■■■□□ 2.68
RNF220-216ENST00000488865 LOC285556D6RIA3 1793 aa31.79■■■□□ 2.68
RNF220-216ENST00000488865 FLT1P17948 1338 aa31.78■■■□□ 2.68
RNF220-216ENST00000488865 GJB1P08034 283 aa31.78■■■□□ 2.68
RNF220-216ENST00000488865 CCL5P13501 91 aa31.78■■■□□ 2.68
RNF220-216ENST00000488865 PABPC4Q13310 644 aaKnown RBP eCLIP31.78■■■□□ 2.68
RNF220-216ENST00000488865 DIEXFQ68CQ4 756 aaKnown RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 METTL16Q86W50 562 aaKnown RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 FOXP4Q8IVH2 680 aaPredicted RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 EAF2Q96CJ1 260 aaPredicted RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 CCDC8Q9H0W5 538 aaPredicted RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 PIH1D3Q9NQM4 214 aaKnown RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 TLR7Q9NYK1 1049 aaKnown RBP31.78■■■□□ 2.68
RNF220-216ENST00000488865 ZBED9Q6R2W3 1325 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 TNPO2O14787 897 aaKnown RBP31.77■■■□□ 2.68
RNF220-216ENST00000488865 GJA8P48165 433 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 FLT3LGP49771 235 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 FAM110CQ1W6H9 321 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 SH3D19Q5HYK7 790 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 CEP85Q6P2H3 762 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 MAPKAPK5Q8IW41 473 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 ANKRD13CQ8N6S4 541 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 MYO5AQ9Y4I1 1855 aaKnown RBP31.77■■■□□ 2.68
RNF220-216ENST00000488865 SIPA1L1O43166 1804 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 FOCADQ5VW36 1801 aa31.77■■■□□ 2.68
RNF220-216ENST00000488865 CDK5RAP2Q96SN8 1893 aa31.76■■■□□ 2.68
RNF220-216ENST00000488865 GCLCP48506 637 aaPredicted RBP31.76■■■□□ 2.67
RNF220-216ENST00000488865 HMGCS2P54868 508 aa31.76■■■□□ 2.67
RNF220-216ENST00000488865 IRF5Q13568 498 aa31.76■■■□□ 2.67
RNF220-216ENST00000488865 HABP4Q5JVS0 413 aaKnown RBP31.76■■■□□ 2.67
RNF220-216ENST00000488865 WDR18Q9BV38 432 aa31.76■■■□□ 2.67
RNF220-216ENST00000488865 RNF208Q9H0X6 261 aa31.76■■■□□ 2.67
RNF220-216ENST00000488865 ADCY3O60266 1144 aa31.75■■■□□ 2.67
RNF220-216ENST00000488865 ASNSP08243 561 aa31.75■■■□□ 2.67
RNF220-216ENST00000488865 PXYLP1Q8TE99 480 aa31.75■■■□□ 2.67
RNF220-216ENST00000488865 CERS3Q8IU89 383 aa31.74■■■□□ 2.67
RNF220-216ENST00000488865 ERC1Q8IUD2 1116 aa31.74■■■□□ 2.67
RNF220-216ENST00000488865 COA7Q96BR5 231 aa31.74■■■□□ 2.67
RNF220-216ENST00000488865 GINM1Q9NU53 330 aa31.74■■■□□ 2.67
RNF220-216ENST00000488865 CYP7A1P22680 504 aa31.73■■■□□ 2.67
RNF220-216ENST00000488865 CRACR2BQ8N4Y2 399 aaPredicted RBP31.73■■■□□ 2.67
RNF220-216ENST00000488865 DNAJC18Q9H819 358 aa31.73■■■□□ 2.67
RNF220-216ENST00000488865 PALD1Q9ULE6 856 aa31.73■■■□□ 2.67
RNF220-216ENST00000488865 TMED8Q6PL24 325 aaPredicted RBP31.72■■■□□ 2.67
RNF220-216ENST00000488865 TRIM34Q9BYJ4 488 aa31.72■■■□□ 2.67
RNF220-216ENST00000488865 ASCC2Q9H1I8 757 aaPredicted RBP31.72■■■□□ 2.67
RNF220-216ENST00000488865 IDH1O75874 414 aaKnown RBP31.71■■■□□ 2.67
RNF220-216ENST00000488865 BACE1P56817 501 aa31.71■■■□□ 2.67
RNF220-216ENST00000488865 DYNLL1P63167 89 aaKnown RBP31.71■■■□□ 2.67
RNF220-216ENST00000488865 PANK1Q8TE04 598 aa31.71■■■□□ 2.67
RNF220-216ENST00000488865 HLA-DOAP06340 250 aa31.7■■■□□ 2.67
RNF220-216ENST00000488865 UBE2Q1Q7Z7E8 422 aa31.7■■■□□ 2.67
RNF220-216ENST00000488865 UNC93B1Q9H1C4 597 aa31.7■■■□□ 2.67
RNF220-216ENST00000488865 EXOC6BQ9Y2D4 811 aa31.7■■■□□ 2.67
RNF220-216ENST00000488865 MS4A1P11836 297 aa31.69■■■□□ 2.66
RNF220-216ENST00000488865 ELNP15502 786 aa31.69■■■□□ 2.66
RNF220-216ENST00000488865 CAPN2P17655 700 aa31.69■■■□□ 2.66
RNF220-216ENST00000488865 MTMR2Q13614 643 aa31.69■■■□□ 2.66
RNF220-216ENST00000488865 HSP90AB4PQ58FF6 505 aa31.69■■■□□ 2.66
RNF220-216ENST00000488865 U2AF1L4Q8WU68 220 aaKnown RBP31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 1626.2 ms